Analysis of interatomic Contacts of Structural Units in PDB entry:
5WAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WAY entry

There are 2 chains in PDB entry 5WAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 493
B
 MET 1ASP 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5WAY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 5Right-handed 310
Helix 2
AA2
A
6 22Right-handed alpha
Helix 3
AA3
A
27 35Right-handed alpha
Helix 4
AA4
A
38 53Right-handed alpha
Helix 5
AA5
A
75 85Right-handed alpha
Helix 6
AA6
A
86 98Right-handed alpha
Helix 7
AA7
A
102 111Right-handed alpha
Helix 8
AA8
A
113 130Right-handed alpha
Helix 9
AA9
A
146 162Right-handed alpha
Helix 10
AB1
A
174 187Right-handed alpha
Helix 11
AB2
A
193 213Right-handed alpha
Helix 12
AB3
A
231 235Right-handed 310
Helix 13
AB4
A
237 250Right-handed alpha
Helix 14
AB5
A
254 262Right-handed alpha
Helix 15
AB6
A
263 267Right-handed 310
Helix 16
AB7
A
273 284Right-handed alpha
Helix 17
AB8
A
284 306Right-handed alpha
Helix 18
AB9
A
311 325Right-handed alpha
Helix 19
AC1
A
338 351Right-handed alpha
Helix 20
AC2
A
351 370Right-handed alpha
Helix 21
AC3
A
374 388Right-handed alpha
Helix 22
AC4
A
391 397Right-handed alpha
Helix 23
AC5
A
412 427Right-handed alpha
Helix 24
AC6
A
442 448Right-handed alpha
Helix 25
AC7
A
475 485Right-handed alpha
Helix 26
AC8
A
489 493Right-handed 310
Helix 27
AC9
B
1 5Right-handed 310
Helix 28
AD1
B
6 22Right-handed alpha
Helix 29
AD2
B
27 36Right-handed alpha
Helix 30
AD3
B
38 53Right-handed alpha
Helix 31
AD4
B
69 73Right-handed 310
Helix 32
AD5
B
74 86Right-handed alpha
Helix 33
AD6
B
86 98Right-handed alpha
Helix 34
AD7
B
102 111Right-handed alpha
Helix 35
AD8
B
113 130Right-handed alpha
Helix 36
AD9
B
146 162Right-handed alpha
Helix 37
AE1
B
174 187Right-handed alpha
Helix 38
AE2
B
193 213Right-handed alpha
Helix 39
AE3
B
230 235Right-handed 310
Helix 40
AE4
B
237 250Right-handed alpha
Helix 41
AE5
B
254 262Right-handed alpha
Helix 42
AE6
B
263 267Right-handed 310
Helix 43
AE7
B
273 284Right-handed alpha
Helix 44
AE8
B
284 306Right-handed alpha
Helix 45
AE9
B
311 324Right-handed alpha
Helix 46
AF1
B
338 351Right-handed alpha
Helix 47
AF2
B
351 370Right-handed alpha
Helix 48
AF3
B
374 388Right-handed alpha
Helix 49
AF4
B
391 398Right-handed alpha
Helix 50
AF5
B
412 427Right-handed alpha
Helix 51
AF6
B
442 449Right-handed alpha
Helix 52
AF7
B
475 485Right-handed alpha
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There are 5 sheets in PDB entry 5WAY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
65 67anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 137first strand
Strand 2
A
142 145anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 435first strand
Strand 2
A
403 408parallel
Strand 3
A
453 456parallel
Strand 4
A
467 470parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 137first strand
Strand 2
B
142 145anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 435first strand
Strand 2
B
403 408parallel
Strand 3
B
453 456parallel
Strand 4
B
467 470parallel
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