Analysis of interatomic Contacts of Structural Units in PDB entry:
5WC0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WC0 entry

There are 6 chains in PDB entry 5WC0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 173	GLY 470
B	TYR 173	MET 472
C	TYR 173	MET 472
D	TYR 173	MET 472
E	TYR 173	MET 472
F	TYR 173	MET 472

There are 89 helices in PDB entry 5WC0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	175	181	Right-handed alpha
Helix 2	AA2	A	198	209	Right-handed alpha
Helix 3	AA3	A	210	215	Right-handed alpha
Helix 4	AA4	A	238	250	Right-handed alpha
Helix 5	AA5	A	270	285	Right-handed alpha
Helix 6	AA6	A	308	320	Right-handed alpha
Helix 7	AA7	A	341	345	Right-handed 310
Helix 8	AA8	A	363	375	Right-handed alpha
Helix 9	AA9	A	385	393	Right-handed alpha
Helix 10	AB1	A	397	415	Right-handed alpha
Helix 11	AB2	A	427	432	Right-handed alpha
Helix 12	AB3	A	433	435	Right-handed 310
Helix 13	AB4	A	439	450	Right-handed alpha
Helix 14	AB5	A	456	466	Right-handed alpha
Helix 15	AB6	B	176	181	Right-handed alpha
Helix 16	AB7	B	198	209	Right-handed alpha
Helix 17	AB8	B	209	215	Right-handed alpha
Helix 18	AB9	B	220	224	Right-handed 310
Helix 19	AC1	B	238	250	Right-handed alpha
Helix 20	AC2	B	271	285	Right-handed alpha
Helix 21	AC3	B	308	321	Right-handed alpha
Helix 22	AC4	B	341	345	Right-handed 310
Helix 23	AC5	B	348	353	Right-handed alpha
Helix 24	AC6	B	363	375	Right-handed alpha
Helix 25	AC7	B	385	392	Right-handed alpha
Helix 26	AC8	B	397	416	Right-handed alpha
Helix 27	AC9	B	427	432	Right-handed alpha
Helix 28	AD1	B	440	449	Right-handed alpha
Helix 29	AD2	B	456	466	Right-handed alpha
Helix 30	AD3	C	175	181	Right-handed alpha
Helix 31	AD4	C	198	208	Right-handed alpha
Helix 32	AD5	C	209	215	Right-handed alpha
Helix 33	AD6	C	241	250	Right-handed alpha
Helix 34	AD7	C	271	285	Right-handed alpha
Helix 35	AD8	C	308	321	Right-handed alpha
Helix 36	AD9	C	341	345	Right-handed 310
Helix 37	AE1	C	348	353	Right-handed alpha
Helix 38	AE2	C	363	375	Right-handed alpha
Helix 39	AE3	C	385	392	Right-handed alpha
Helix 40	AE4	C	397	415	Right-handed alpha
Helix 41	AE5	C	427	432	Right-handed alpha
Helix 42	AE6	C	439	450	Right-handed alpha
Helix 43	AE7	C	455	466	Right-handed alpha
Helix 44	AE8	D	175	180	Right-handed alpha
Helix 45	AE9	D	198	208	Right-handed alpha
Helix 46	AF1	D	209	215	Right-handed alpha
Helix 47	AF2	D	220	224	Right-handed 310
Helix 48	AF3	D	238	250	Right-handed alpha
Helix 49	AF4	D	271	284	Right-handed alpha
Helix 50	AF5	D	308	322	Right-handed alpha
Helix 51	AF6	D	341	345	Right-handed 310
Helix 52	AF7	D	348	353	Right-handed alpha
Helix 53	AF8	D	363	375	Right-handed alpha
Helix 54	AF9	D	385	392	Right-handed alpha
Helix 55	AG1	D	397	415	Right-handed alpha
Helix 56	AG2	D	427	432	Right-handed alpha
Helix 57	AG3	D	433	435	Right-handed 310
Helix 58	AG4	D	439	450	Right-handed alpha
Helix 59	AG5	D	456	468	Right-handed alpha
Helix 60	AG6	E	176	181	Right-handed alpha
Helix 61	AG7	E	198	209	Right-handed alpha
Helix 62	AG8	E	209	215	Right-handed alpha
Helix 63	AG9	E	220	224	Right-handed 310
Helix 64	AH1	E	239	250	Right-handed alpha
Helix 65	AH2	E	271	285	Right-handed alpha
Helix 66	AH3	E	308	321	Right-handed alpha
Helix 67	AH4	E	341	345	Right-handed 310
Helix 68	AH5	E	348	353	Right-handed alpha
Helix 69	AH6	E	363	375	Right-handed alpha
Helix 70	AH7	E	385	393	Right-handed alpha
Helix 71	AH8	E	397	416	Right-handed alpha
Helix 72	AH9	E	427	432	Right-handed alpha
Helix 73	AI1	E	439	450	Right-handed alpha
Helix 74	AI2	E	456	467	Right-handed alpha
Helix 75	AI3	F	175	182	Right-handed alpha
Helix 76	AI4	F	198	208	Right-handed alpha
Helix 77	AI5	F	210	215	Right-handed alpha
Helix 78	AI6	F	220	224	Right-handed 310
Helix 79	AI7	F	241	250	Right-handed alpha
Helix 80	AI8	F	271	285	Right-handed alpha
Helix 81	AI9	F	308	321	Right-handed alpha
Helix 82	AJ1	F	341	345	Right-handed 310
Helix 83	AJ2	F	346	353	Right-handed alpha
Helix 84	AJ3	F	363	375	Right-handed alpha
Helix 85	AJ4	F	385	391	Right-handed alpha
Helix 86	AJ5	F	397	416	Right-handed alpha
Helix 87	AJ6	F	427	432	Right-handed alpha
Helix 88	AJ7	F	439	450	Right-handed alpha
Helix 89	AJ8	F	455	466	Right-handed alpha

There are 12 sheets in PDB entry 5WC0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	230	231	first strand
Strand 2	A	356	357	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	253	256	first strand
Strand 2	A	287	290	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	254	255	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	232	first strand
Strand 2	B	355	358	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	288	290	first strand
Strand 2	B	334	336	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	232	first strand
Strand 2	C	355	358	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	288	292	first strand
Strand 2	C	334	338	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	182	183	first strand
Strand 2	D	253	257	anti-parallel
Strand 3	D	287	291	parallel
Strand 4	D	333	334	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	232	first strand
Strand 2	D	355	358	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	183	first strand
Strand 2	E	254	255	anti-parallel
Strand 3	E	288	290	parallel
Strand 4	E	334	336	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	229	230	first strand
Strand 2	E	355	356	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	253	255	first strand
Strand 2	F	287	292	parallel
Strand 3	F	333	338	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WC0

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WC0