Analysis of interatomic Contacts of Structural Units in PDB entry:
5WC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WC2 entry

There is 1 chain in PDB entry 5WC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 19ALA 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5WC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 50Right-handed alpha
Helix 2
AA2
A
63 69Right-handed alpha
Helix 3
AA3
A
129 133Right-handed 310
Helix 4
AA4
A
134 139Right-handed alpha
Helix 5
AA5
A
144 162Right-handed alpha
Helix 6
AA6
A
184 200Right-handed alpha
Helix 7
AA7
A
229 241Right-handed alpha
Helix 8
AA8
A
254 260Right-handed alpha
Helix 9
AA9
A
273 288Right-handed alpha
Helix 10
AB1
A
307 312Right-handed alpha
Helix 11
AB2
A
323 341Right-handed alpha
Helix 12
AB3
A
352 359Right-handed alpha
Helix 13
AB4
A
367 380Right-handed alpha
Helix 14
AB5
A
384 400Right-handed alpha
Helix 15
AB6
A
406 429Right-handed alpha
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There are 2 sheets in PDB entry 5WC2. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 58first strand
Strand 2
A
70 76anti-parallel
Strand 3
A
20 27anti-parallel
Strand 4
A
94 101parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 127first strand
Strand 2
A
206 212anti-parallel
Strand 3
A
245 251parallel
Strand 4
A
293 299parallel
Strand 5
A
174 178parallel
Strand 6
A
315 318parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il