Analysis of interatomic Contacts of Structural Units in PDB entry:
5WCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WCJ entry

There is 1 chain in PDB entry 5WCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 470LEU 693
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5WCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
471 480Right-handed alpha
Helix 2
AA2
A
481 484Right-handed 310
Helix 3
AA3
A
486 493Right-handed alpha
Helix 4
AA4
A
505 515Right-handed alpha
Helix 5
AA5
A
526 537Right-handed alpha
Helix 6
AA6
A
551 561Right-handed alpha
Helix 7
AA7
A
562 566Right-handed 310
Helix 8
AA8
A
589 593Right-handed 310
Helix 9
AA9
A
594 604Right-handed alpha
Helix 10
AB1
A
619 634Right-handed alpha
Helix 11
AB2
A
655 659Right-handed 310
Helix 12
AB3
A
661 678Right-handed alpha
Helix 13
AB4
A
688 693Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5WCJ.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
545 549first strand
Strand 2
A
518 524parallel
Strand 3
A
495 500parallel
Strand 4
A
569 574parallel
Strand 5
A
605 615parallel
Strand 6
A
648 653anti-parallel
Strand 7
A
636 641anti-parallel
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