Analysis of interatomic Contacts of Structural Units in PDB entry:
5WCN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WCN entry

There are 2 chains in PDB entry 5WCN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 MET 20ILE 401
A
 MET 20ILE 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 5WCN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
M
43 56Right-handed alpha
Helix 2
AA2
M
71 81Right-handed alpha
Helix 3
AA3
M
102 121Right-handed alpha
Helix 4
AA4
M
131 144Right-handed alpha
Helix 5
AA5
M
154 159Right-handed 310
Helix 6
AA6
M
162 173Right-handed alpha
Helix 7
AA7
M
175 188Right-handed alpha
Helix 8
AA8
M
191 198Right-handed 310
Helix 9
AA9
M
212 217Right-handed alpha
Helix 10
AB1
M
236 247Right-handed alpha
Helix 11
AB2
M
263 283Right-handed alpha
Helix 12
AB3
M
295 306Right-handed alpha
Helix 13
AB4
M
321 330Right-handed alpha
Helix 14
AB5
M
339 349Right-handed alpha
Helix 15
AB6
M
357 366Right-handed alpha
Helix 16
AB7
M
372 388Right-handed alpha
Helix 17
AB8
M
397 401Right-handed 310
Helix 18
AB9
A
43 56Right-handed alpha
Helix 19
AC1
A
67 70Right-handed 310
Helix 20
AC2
A
71 81Right-handed alpha
Helix 21
AC3
A
82 86Right-handed 310
Helix 22
AC4
A
102 121Right-handed alpha
Helix 23
AC5
A
131 144Right-handed alpha
Helix 24
AC6
A
154 159Right-handed 310
Helix 25
AC7
A
162 173Right-handed alpha
Helix 26
AC8
A
175 188Right-handed alpha
Helix 27
AC9
A
191 198Right-handed 310
Helix 28
AD1
A
212 217Right-handed alpha
Helix 29
AD2
A
236 247Right-handed alpha
Helix 30
AD3
A
263 283Right-handed alpha
Helix 31
AD4
A
295 306Right-handed alpha
Helix 32
AD5
A
321 330Right-handed alpha
Helix 33
AD6
A
339 349Right-handed alpha
Helix 34
AD7
A
357 366Right-handed alpha
Helix 35
AD8
A
372 388Right-handed alpha
Helix 36
AD9
A
397 401Right-handed 310
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There are 4 sheets in PDB entry 5WCN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
88 94first strand
Strand 2
M
60 67parallel
Strand 3
M
35 39parallel
Strand 4
M
124 127parallel
Strand 5
M
147 151parallel
Strand 6
M
206 209parallel
Strand 7
M
224 226parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
312 315first strand
Strand 2
M
286 289parallel
Strand 3
M
253 256parallel
Strand 4
M
333 336parallel
Strand 5
M
353 356parallel
Strand 6
M
392 394parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 93first strand
Strand 2
A
60 66parallel
Strand 3
A
35 39parallel
Strand 4
A
124 127parallel
Strand 5
A
147 151parallel
Strand 6
A
206 209parallel
Strand 7
A
224 226parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 315first strand
Strand 2
A
286 289parallel
Strand 3
A
253 256parallel
Strand 4
A
333 336parallel
Strand 5
A
353 356parallel
Strand 6
A
392 394parallel
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