Analysis of interatomic Contacts of Structural Units in PDB entry:
5WCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WCZ entry

There are 2 chains in PDB entry 5WCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3ILE 561
B
 GLU 3ILE 561
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5WCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed 310
Helix 2
AA2
A
14 18Right-handed 310
Helix 3
AA3
A
28 35Right-handed alpha
Helix 4
AA4
A
35 43Right-handed alpha
Helix 5
AA5
A
76 90Right-handed alpha
Helix 6
AA6
A
107 114Right-handed alpha
Helix 7
AA7
A
121 125Right-handed 310
Helix 8
AA8
A
174 190Right-handed alpha
Helix 9
AA9
A
200 204Right-handed 310
Helix 10
AB1
A
224 228Right-handed 310
Helix 11
AB2
A
232 244Right-handed alpha
Helix 12
AB3
A
245 248Right-handed 310
Helix 13
AB4
A
260 269Right-handed alpha
Helix 14
AB5
A
270 273Right-handed 310
Helix 15
AB6
A
284 288Right-handed 310
Helix 16
AB7
A
294 298Right-handed 310
Helix 17
AB8
A
303 318Right-handed alpha
Helix 18
AB9
A
335 341Right-handed alpha
Helix 19
AC1
A
346 360Right-handed alpha
Helix 20
AC2
A
370 374Right-handed 310
Helix 21
AC3
A
381 385Right-handed 310
Helix 22
AC4
A
387 398Right-handed alpha
Helix 23
AC5
A
405 417Right-handed alpha
Helix 24
AC6
A
418 422Right-handed 310
Helix 25
AC7
A
430 435Right-handed 310
Helix 26
AC8
A
452 458Right-handed alpha
Helix 27
AC9
A
462 477Right-handed alpha
Helix 28
AD1
A
477 483Right-handed alpha
Helix 29
AD2
A
523 527Right-handed 310
Helix 30
AD3
B
3 7Right-handed 310
Helix 31
AD4
B
14 18Right-handed 310
Helix 32
AD5
B
28 35Right-handed alpha
Helix 33
AD6
B
35 43Right-handed alpha
Helix 34
AD7
B
76 90Right-handed alpha
Helix 35
AD8
B
107 114Right-handed alpha
Helix 36
AD9
B
121 125Right-handed 310
Helix 37
AE1
B
174 191Right-handed alpha
Helix 38
AE2
B
200 204Right-handed 310
Helix 39
AE3
B
224 228Right-handed 310
Helix 40
AE4
B
232 244Right-handed alpha
Helix 41
AE5
B
245 248Right-handed 310
Helix 42
AE6
B
260 269Right-handed alpha
Helix 43
AE7
B
270 273Right-handed 310
Helix 44
AE8
B
294 298Right-handed 310
Helix 45
AE9
B
303 318Right-handed alpha
Helix 46
AF1
B
335 341Right-handed alpha
Helix 47
AF2
B
346 360Right-handed alpha
Helix 48
AF3
B
370 374Right-handed 310
Helix 49
AF4
B
381 385Right-handed 310
Helix 50
AF5
B
387 398Right-handed alpha
Helix 51
AF6
B
405 417Right-handed alpha
Helix 52
AF7
B
418 422Right-handed 310
Helix 53
AF8
B
430 435Right-handed 310
Helix 54
AF9
B
452 459Right-handed alpha
Helix 55
AG1
B
462 477Right-handed alpha
Helix 56
AG2
B
477 483Right-handed alpha
Helix 57
AG3
B
523 527Right-handed 310
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There are 10 sheets in PDB entry 5WCZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 279first strand
Strand 2
A
251 255parallel
Strand 3
A
195 198parallel
Strand 4
A
93 98parallel
Strand 5
A
46 49parallel
Strand 6
A
10 13parallel
Strand 7
A
364 368parallel
Strand 8
A
325 326parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
66 70anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
149 152anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 488first strand
Strand 2
A
495 502anti-parallel
Strand 3
A
505 512anti-parallel
Strand 4
A
555 561anti-parallel
Strand 5
A
530 536anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 521first strand
Strand 2
A
547 550anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
277 279first strand
Strand 2
B
251 255parallel
Strand 3
B
195 198parallel
Strand 4
B
93 98parallel
Strand 5
B
46 49parallel
Strand 6
B
10 13parallel
Strand 7
B
364 368parallel
Strand 8
B
325 326parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
66 70anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 128first strand
Strand 2
B
158 160anti-parallel
Strand 3
B
149 151anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
486 488first strand
Strand 2
B
495 502anti-parallel
Strand 3
B
505 512anti-parallel
Strand 4
B
555 561anti-parallel
Strand 5
B
530 536anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
518 521first strand
Strand 2
B
547 550anti-parallel
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