Analysis of interatomic Contacts of Structural Units in PDB entry:
5WEG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WEG entry

There are 2 chains in PDB entry 5WEG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 13	LEU 476
B	GLU 13	LEU 476

There are 50 helices in PDB entry 5WEG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	25	Right-handed alpha
Helix 2	AA2	A	29	45	Right-handed alpha
Helix 3	AA3	A	52	56	Right-handed 310
Helix 4	AA4	A	68	70	Right-handed 310
Helix 5	AA5	A	77	85	Right-handed alpha
Helix 6	AA6	A	97	101	Right-handed 310
Helix 7	AA7	A	105	108	Right-handed 310
Helix 8	AA8	A	117	133	Right-handed alpha
Helix 9	AA9	A	146	154	Right-handed alpha
Helix 10	AB1	A	155	158	Right-handed 310
Helix 11	AB2	A	190	192	Right-handed 310
Helix 12	AB3	A	198	200	Right-handed 310
Helix 13	AB4	A	201	209	Right-handed alpha
Helix 14	AB5	A	210	218	Right-handed alpha
Helix 15	AB6	A	236	247	Right-handed alpha
Helix 16	AB7	A	278	282	Right-handed 310
Helix 17	AB8	A	283	285	Right-handed 310
Helix 18	AB9	A	286	292	Right-handed alpha
Helix 19	AC1	A	308	317	Right-handed alpha
Helix 20	AC2	A	343	350	Right-handed 310
Helix 21	AC3	A	359	363	Right-handed 310
Helix 22	AC4	A	368	377	Right-handed alpha
Helix 23	AC5	A	405	408	Right-handed 310
Helix 24	AC6	A	409	416	Right-handed alpha
Helix 25	AC7	A	472	476	Right-handed 310
Helix 26	AC8	B	14	25	Right-handed alpha
Helix 27	AC9	B	29	46	Right-handed alpha
Helix 28	AD1	B	52	56	Right-handed 310
Helix 29	AD2	B	68	70	Right-handed 310
Helix 30	AD3	B	77	85	Right-handed alpha
Helix 31	AD4	B	97	101	Right-handed 310
Helix 32	AD5	B	105	108	Right-handed 310
Helix 33	AD6	B	117	133	Right-handed alpha
Helix 34	AD7	B	146	154	Right-handed alpha
Helix 35	AD8	B	155	158	Right-handed 310
Helix 36	AD9	B	190	192	Right-handed 310
Helix 37	AE1	B	198	200	Right-handed 310
Helix 38	AE2	B	201	209	Right-handed alpha
Helix 39	AE3	B	210	218	Right-handed alpha
Helix 40	AE4	B	236	247	Right-handed alpha
Helix 41	AE5	B	278	282	Right-handed 310
Helix 42	AE6	B	283	285	Right-handed 310
Helix 43	AE7	B	286	292	Right-handed alpha
Helix 44	AE8	B	308	317	Right-handed alpha
Helix 45	AE9	B	343	350	Right-handed 310
Helix 46	AF1	B	359	363	Right-handed 310
Helix 47	AF2	B	368	377	Right-handed alpha
Helix 48	AF3	B	405	408	Right-handed 310
Helix 49	AF4	B	409	417	Right-handed alpha
Helix 50	AF5	B	472	476	Right-handed 310

There are 16 sheets in PDB entry 5WEG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	354	357	parallel
Strand 3	A	250	256	parallel
Strand 4	A	298	307	anti-parallel
Strand 5	A	222	227	anti-parallel
Strand 6	A	87	93	parallel
Strand 7	A	138	142	parallel
Strand 8	A	164	168	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	112	first strand
Strand 2	A	115	116	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	173	first strand
Strand 2	A	194	195	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	181	182	first strand
Strand 2	A	175	176	anti-parallel
Strand 3	A	334	337	anti-parallel
Strand 4	A	329	331	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	270	first strand
Strand 2	A	273	277	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	383	first strand
Strand 2	A	386	389	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	400	403	first strand
Strand 2	A	426	432	parallel
Strand 3	A	442	450	parallel
Strand 4	A	464	470	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	434	437	first strand
Strand 2	A	456	459	parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	66	first strand
Strand 2	B	354	357	parallel
Strand 3	B	250	256	parallel
Strand 4	B	298	307	anti-parallel
Strand 5	B	222	227	anti-parallel
Strand 6	B	87	93	parallel
Strand 7	B	138	142	parallel
Strand 8	B	164	168	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	112	first strand
Strand 2	B	115	116	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	173	first strand
Strand 2	B	194	195	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	181	182	first strand
Strand 2	B	175	176	anti-parallel
Strand 3	B	334	337	anti-parallel
Strand 4	B	329	331	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	270	first strand
Strand 2	B	273	277	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	383	first strand
Strand 2	B	386	389	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	400	403	first strand
Strand 2	B	426	432	parallel
Strand 3	B	442	450	parallel
Strand 4	B	464	470	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	437	first strand
Strand 2	B	457	459	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WEG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WEG