Analysis of interatomic Contacts of Structural Units in PDB entry:
5WER

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WER entry

There are 12 chains in PDB entry 5WER (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	GLY 275
B	ILE 1	ASP 98
C	TRP 9	VAL 378
D	SER 2	GLY 275
E	ILE 1	ASP 98
F	ASP 13	VAL 378
G	SER 2	GLY 275
H	ILE 1	ASP 98
I	ALA 11	GLN 377
J	HIS 3	GLY 275
K	ILE 1	ASP 98
L	ASP 13	VAL 378

There are 26 helices in PDB entry 5WER. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	55	Right-handed 310
Helix 2	AA2	A	56	85	Right-handed alpha
Helix 3	AA3	A	137	151	Right-handed alpha
Helix 4	AA4	A	151	162	Right-handed alpha
Helix 5	AA5	A	162	175	Right-handed alpha
Helix 6	AA6	A	194	198	Right-handed 310
Helix 7	AA7	C	253	257	Right-handed 310
Helix 8	AA8	D	51	55	Right-handed 310
Helix 9	AA9	D	56	85	Right-handed alpha
Helix 10	AB1	D	137	151	Right-handed alpha
Helix 11	AB2	D	151	162	Right-handed alpha
Helix 12	AB3	D	162	175	Right-handed alpha
Helix 13	AB4	D	175	180	Right-handed alpha
Helix 14	AB5	D	224	228	Right-handed 310
Helix 15	AB6	F	253	257	Right-handed 310
Helix 16	AB7	G	51	55	Right-handed 310
Helix 17	AB8	G	56	85	Right-handed alpha
Helix 18	AB9	G	137	151	Right-handed alpha
Helix 19	AC1	G	151	162	Right-handed alpha
Helix 20	AC2	G	162	174	Right-handed alpha
Helix 21	AC3	I	253	257	Right-handed 310
Helix 22	AC4	J	59	83	Right-handed alpha
Helix 23	AC5	J	137	151	Right-handed alpha
Helix 24	AC6	J	151	162	Right-handed alpha
Helix 25	AC7	J	162	175	Right-handed alpha
Helix 26	AC8	L	253	257	Right-handed 310

There are 47 sheets in PDB entry 5WER. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	31	36	first strand
Strand 2	A	21	28	anti-parallel
Strand 3	A	3	12	anti-parallel
Strand 4	A	94	103	anti-parallel
Strand 5	A	109	118	anti-parallel
Strand 6	A	121	126	anti-parallel
Strand 7	A	133	135	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	191	first strand
Strand 2	A	201	208	anti-parallel
Strand 3	A	241	247	anti-parallel
Strand 4	A	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	214	215	first strand
Strand 2	A	261	262	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	11	first strand
Strand 2	B	21	30	anti-parallel
Strand 3	B	62	70	anti-parallel
Strand 4	B	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	44	45	first strand
Strand 2	B	37	41	anti-parallel
Strand 3	B	78	82	anti-parallel
Strand 4	B	91	94	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	16	first strand
Strand 2	C	41	47	anti-parallel
Strand 3	C	66	69	parallel
Strand 4	C	166	174	parallel
Strand 5	C	133	139	anti-parallel
Strand 6	C	120	127	anti-parallel
Strand 7	C	99	105	anti-parallel
Strand 8	C	19	20	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	16	first strand
Strand 2	C	41	47	anti-parallel
Strand 3	C	66	69	parallel
Strand 4	C	166	174	parallel
Strand 5	C	192	195	anti-parallel
Strand 6	C	242	244	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	181	first strand
Strand 2	C	270	279	parallel
Strand 3	C	258	266	anti-parallel
Strand 4	C	201	210	anti-parallel
Strand 5	C	213	220	anti-parallel
Strand 6	C	225	227	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	189	first strand
Strand 2	C	247	251	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	285	first strand
Strand 2	C	297	305	anti-parallel
Strand 3	C	288	290	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	285	first strand
Strand 2	C	297	305	anti-parallel
Strand 3	C	342	349	anti-parallel
Strand 4	C	335	336	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	312	first strand
Strand 2	C	363	364	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	315	316	first strand
Strand 2	C	359	360	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	31	33	first strand
Strand 2	D	18	28	anti-parallel
Strand 3	D	3	14	anti-parallel
Strand 4	D	94	104	anti-parallel
Strand 5	D	108	118	anti-parallel
Strand 6	D	121	126	anti-parallel
Strand 7	D	133	135	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	189	first strand
Strand 2	D	198	208	anti-parallel
Strand 3	D	241	250	anti-parallel
Strand 4	D	229	230	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	189	first strand
Strand 2	D	198	208	anti-parallel
Strand 3	D	241	250	anti-parallel
Strand 4	D	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	271	272	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	21	30	anti-parallel
Strand 3	E	62	70	anti-parallel
Strand 4	E	50	51	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	11	first strand
Strand 2	E	21	30	anti-parallel
Strand 3	E	62	70	anti-parallel
Strand 4	E	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	45	first strand
Strand 2	E	36	41	anti-parallel
Strand 3	E	79	83	anti-parallel
Strand 4	E	92	94	anti-parallel
Strand 5	F	331	332	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	14	16	first strand
Strand 2	F	41	43	anti-parallel
Strand 3	F	67	68	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	100	103	first strand
Strand 2	F	120	126	anti-parallel
Strand 3	F	133	139	anti-parallel
Strand 4	F	167	174	anti-parallel
Strand 5	F	192	195	anti-parallel
Strand 6	F	242	244	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	178	182	first strand
Strand 2	F	270	280	parallel
Strand 3	F	258	265	anti-parallel
Strand 4	F	204	210	anti-parallel
Strand 5	F	213	220	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	189	first strand
Strand 2	F	247	248	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	284	289	first strand
Strand 2	F	298	303	anti-parallel
Strand 3	F	342	348	anti-parallel
Strand 4	F	335	336	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	312	315	first strand
Strand 2	F	360	363	anti-parallel
Strand 3	F	372	373	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	47	first strand
Strand 2	G	31	35	anti-parallel
Strand 3	G	21	28	anti-parallel
Strand 4	G	4	12	anti-parallel
Strand 5	G	94	102	anti-parallel
Strand 6	G	111	118	anti-parallel
Strand 7	G	121	126	anti-parallel
Strand 8	G	133	135	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	185	190	first strand
Strand 2	G	199	207	anti-parallel
Strand 3	G	240	249	anti-parallel
Strand 4	G	234	236	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	214	216	first strand
Strand 2	G	260	262	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	229	230	first strand
Strand 2	I	336	337	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	11	first strand
Strand 2	H	21	30	anti-parallel
Strand 3	H	62	70	anti-parallel
Strand 4	H	55	56	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	45	first strand
Strand 2	H	36	41	anti-parallel
Strand 3	H	78	83	anti-parallel
Strand 4	H	91	94	anti-parallel
Strand 5	I	331	332	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	14	19	first strand
Strand 2	I	38	43	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	120	123	first strand
Strand 2	I	133	139	anti-parallel
Strand 3	I	167	174	anti-parallel
Strand 4	I	192	195	anti-parallel
Strand 5	I	243	244	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	178	180	first strand
Strand 2	I	269	278	parallel
Strand 3	I	258	266	anti-parallel
Strand 4	I	204	209	anti-parallel
Strand 5	I	216	220	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	187	189	first strand
Strand 2	I	247	249	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	286	first strand
Strand 2	I	298	303	anti-parallel
Strand 3	I	343	348	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	45	47	first strand
Strand 2	J	31	37	anti-parallel
Strand 3	J	23	28	anti-parallel
Strand 4	J	4	12	anti-parallel
Strand 5	J	94	103	anti-parallel
Strand 6	J	109	118	anti-parallel
Strand 7	J	121	126	anti-parallel
Strand 8	J	133	135	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	188	190	first strand
Strand 2	J	201	208	anti-parallel
Strand 3	J	241	247	anti-parallel
Strand 4	J	234	235	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	188	190	first strand
Strand 2	J	201	208	anti-parallel
Strand 3	J	241	247	anti-parallel
Strand 4	J	228	230	anti-parallel
Strand 5	L	335	337	anti-parallel
Strand 6	L	342	345	anti-parallel
Strand 7	L	301	303	anti-parallel
Strand 8	L	284	285	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	6	11	first strand
Strand 2	K	22	30	anti-parallel
Strand 3	K	62	69	anti-parallel
Strand 4	K	50	51	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	44	45	first strand
Strand 2	K	36	41	anti-parallel
Strand 3	K	78	83	anti-parallel
Strand 4	K	91	93	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	39	42	first strand
Strand 2	L	64	69	parallel
Strand 3	L	166	174	parallel
Strand 4	L	133	139	anti-parallel
Strand 5	L	120	127	anti-parallel
Strand 6	L	99	103	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	39	42	first strand
Strand 2	L	64	69	parallel
Strand 3	L	166	174	parallel
Strand 4	L	192	194	anti-parallel
Strand 5	L	242	244	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	178	181	first strand
Strand 2	L	270	279	parallel
Strand 3	L	258	265	anti-parallel
Strand 4	L	203	210	anti-parallel
Strand 5	L	213	220	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	297	298	first strand
Strand 2	L	348	349	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	312	316	first strand
Strand 2	L	357	363	anti-parallel
Strand 3	L	373	376	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WER

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WER