Analysis of interatomic Contacts of Structural Units in PDB entry:
5WEW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WEW entry

There are 8 chains in PDB entry 5WEW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	HIS 140
B	MET 1	HIS 141
C	MET 1	GLU 138
D	MET 1	PHE 137
E	MET 1	PHE 137
F	MET 1	PHE 137
G	MET 1	HIS 141
H	MET 1	HIS 141

There are 31 helices in PDB entry 5WEW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	24	Right-handed alpha
Helix 2	AA2	A	59	63	Right-handed 310
Helix 3	AA3	A	73	87	Right-handed alpha
Helix 4	AA4	A	118	129	Right-handed alpha
Helix 5	AA5	B	14	24	Right-handed alpha
Helix 6	AA6	B	59	63	Right-handed 310
Helix 7	AA7	B	73	87	Right-handed alpha
Helix 8	AA8	B	118	129	Right-handed alpha
Helix 9	AA9	C	14	24	Right-handed alpha
Helix 10	AB1	C	59	63	Right-handed 310
Helix 11	AB2	C	76	87	Right-handed alpha
Helix 12	AB3	C	118	129	Right-handed alpha
Helix 13	AB4	D	14	24	Right-handed alpha
Helix 14	AB5	D	59	63	Right-handed 310
Helix 15	AB6	D	76	87	Right-handed alpha
Helix 16	AB7	D	118	129	Right-handed alpha
Helix 17	AB8	E	14	24	Right-handed alpha
Helix 18	AB9	E	59	63	Right-handed 310
Helix 19	AC1	E	118	126	Right-handed alpha
Helix 20	AC2	F	14	24	Right-handed alpha
Helix 21	AC3	F	59	63	Right-handed 310
Helix 22	AC4	F	73	87	Right-handed alpha
Helix 23	AC5	F	118	129	Right-handed alpha
Helix 24	AC6	G	14	25	Right-handed alpha
Helix 25	AC7	G	59	63	Right-handed 310
Helix 26	AC8	G	73	87	Right-handed alpha
Helix 27	AC9	G	118	129	Right-handed alpha
Helix 28	AD1	H	14	24	Right-handed alpha
Helix 29	AD2	H	59	63	Right-handed 310
Helix 30	AD3	H	73	87	Right-handed alpha
Helix 31	AD4	H	118	129	Right-handed alpha

There are 7 sheets in PDB entry 5WEW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 18 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	91	93	first strand
Strand 2	B	101	105	anti-parallel
Strand 3	B	111	115	anti-parallel
Strand 4	B	67	72	parallel
Strand 5	A	2	12	anti-parallel
Strand 6	A	45	51	parallel
Strand 7	A	37	42	anti-parallel
Strand 8	A	29	34	anti-parallel
Strand 9	B	135	138	anti-parallel
Strand 10	H	135	138	anti-parallel
Strand 11	G	29	34	anti-parallel
Strand 12	G	37	42	anti-parallel
Strand 13	G	45	51	anti-parallel
Strand 14	G	2	12	parallel
Strand 15	H	67	72	anti-parallel
Strand 16	H	111	115	parallel
Strand 17	H	101	105	anti-parallel
Strand 18	H	91	93	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	91	93	first strand
Strand 2	A	101	105	anti-parallel
Strand 3	A	111	115	anti-parallel
Strand 4	A	67	72	parallel
Strand 5	B	2	12	anti-parallel
Strand 6	B	45	51	parallel
Strand 7	B	37	42	anti-parallel
Strand 8	B	29	34	anti-parallel
Strand 9	A	135	136	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	91	93	first strand
Strand 2	D	101	105	anti-parallel
Strand 3	D	111	115	anti-parallel
Strand 4	D	67	71	parallel
Strand 5	C	4	12	anti-parallel
Strand 6	C	45	51	parallel
Strand 7	C	37	42	anti-parallel
Strand 8	C	29	34	anti-parallel
Strand 9	D	135	136	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	93	first strand
Strand 2	C	101	105	anti-parallel
Strand 3	C	111	115	anti-parallel
Strand 4	C	67	72	parallel
Strand 5	D	2	12	anti-parallel
Strand 6	D	45	51	parallel
Strand 7	D	37	42	anti-parallel
Strand 8	D	29	34	anti-parallel
Strand 9	C	135	136	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	91	93	first strand
Strand 2	F	100	105	anti-parallel
Strand 3	F	111	116	anti-parallel
Strand 4	F	67	72	parallel
Strand 5	E	2	12	anti-parallel
Strand 6	E	45	51	parallel
Strand 7	E	37	42	anti-parallel
Strand 8	E	29	34	anti-parallel
Strand 9	F	135	136	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	105	first strand
Strand 2	E	111	115	anti-parallel
Strand 3	E	67	72	parallel
Strand 4	F	2	12	anti-parallel
Strand 5	F	45	51	parallel
Strand 6	F	37	42	anti-parallel
Strand 7	F	29	34	anti-parallel
Strand 8	E	135	136	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	91	93	first strand
Strand 2	G	101	105	anti-parallel
Strand 3	G	111	115	anti-parallel
Strand 4	G	67	72	parallel
Strand 5	H	2	12	anti-parallel
Strand 6	H	45	51	parallel
Strand 7	H	37	42	anti-parallel
Strand 8	H	29	34	anti-parallel
Strand 9	G	135	136	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WEW

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WEW