Analysis of interatomic Contacts of Structural Units in PDB entry:
5WG6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WG6 entry

There are 3 chains in PDB entry 5WG6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 31	LYS 2687
B	SER 81	LEU 440
C	ALA 35	LYS 713

There are 43 helices in PDB entry 5WG6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	31	61	Right-handed alpha
Helix 2	AA2	A	273	278	Right-handed alpha
Helix 3	AA3	A	278	285	Right-handed alpha
Helix 4	AA4	A	302	307	Right-handed 310
Helix 5	AA5	A	433	447	Right-handed alpha
Helix 6	AA6	A	450	459	Right-handed alpha
Helix 7	AA7	A	463	465	Right-handed 310
Helix 8	AA8	A	466	472	Right-handed alpha
Helix 9	AA9	A	534	540	Right-handed alpha
Helix 10	AB1	A	571	576	Right-handed alpha
Helix 11	AB2	A	604	609	Right-handed alpha
Helix 12	AB3	A	648	659	Right-handed alpha
Helix 13	AB4	A	660	662	Right-handed 310
Helix 14	AB5	A	683	687	Right-handed 310
Helix 15	AB6	A	2575	2579	Right-handed 310
Helix 16	AB7	A	2589	2602	Right-handed alpha
Helix 17	AB8	A	2607	2625	Right-handed alpha
Helix 18	AB9	A	2628	2630	Right-handed 310
Helix 19	AC1	A	2631	2650	Right-handed alpha
Helix 20	AC2	A	2652	2666	Right-handed alpha
Helix 21	AC3	A	2670	2686	Right-handed alpha
Helix 22	AC4	B	267	279	Right-handed alpha
Helix 23	AC5	B	339	343	Right-handed 310
Helix 24	AC6	C	36	61	Right-handed alpha
Helix 25	AC7	C	273	278	Right-handed alpha
Helix 26	AC8	C	278	285	Right-handed alpha
Helix 27	AC9	C	302	307	Right-handed 310
Helix 28	AD1	C	434	448	Right-handed alpha
Helix 29	AD2	C	453	459	Right-handed alpha
Helix 30	AD3	C	462	470	Right-handed alpha
Helix 31	AD4	C	534	540	Right-handed alpha
Helix 32	AD5	C	571	576	Right-handed alpha
Helix 33	AD6	C	604	609	Right-handed alpha
Helix 34	AD7	C	648	660	Right-handed alpha
Helix 35	AD8	C	683	687	Right-handed 310
Helix 36	AD9	C	2575	2579	Right-handed 310
Helix 37	AE1	C	2589	2602	Right-handed alpha
Helix 38	AE2	C	2610	2625	Right-handed alpha
Helix 39	AE3	C	2630	2650	Right-handed alpha
Helix 40	AE4	C	2652	2666	Right-handed alpha
Helix 41	AE5	C	2670	2686	Right-handed alpha
Helix 42	AE6	D	267	279	Right-handed alpha
Helix 43	AE7	D	281	285	Right-handed 310

There are 22 sheets in PDB entry 5WG6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	85	first strand
Strand 2	A	94	97	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	100	first strand
Strand 2	B	132	139	parallel
Strand 3	B	120	126	anti-parallel
Strand 4	B	112	117	anti-parallel
Strand 5	B	98	101	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	673	681	parallel
Strand 3	A	643	647	anti-parallel
Strand 4	A	120	121	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	673	681	parallel
Strand 3	A	666	668	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	614	618	first strand
Strand 2	A	624	628	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	637	641	first strand
Strand 2	A	705	712	anti-parallel
Strand 3	A	695	702	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	688	689	first strand
Strand 2	A	723	724	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	89	first strand
Strand 2	B	433	438	anti-parallel
Strand 3	B	424	429	anti-parallel
Strand 4	B	413	418	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	154	first strand
Strand 2	B	161	167	anti-parallel
Strand 3	B	172	173	anti-parallel
Strand 4	B	185	186	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	193	198	first strand
Strand 2	B	206	210	anti-parallel
Strand 3	B	215	217	anti-parallel
Strand 4	B	227	229	anti-parallel
Strand 5	B	292	294	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	243	first strand
Strand 2	B	250	255	anti-parallel
Strand 3	B	260	264	anti-parallel
Strand 4	B	299	301	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	314	first strand
Strand 2	B	319	323	anti-parallel
Strand 3	B	327	333	anti-parallel
Strand 4	B	350	357	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	386	390	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	121	first strand
Strand 2	C	644	647	parallel
Strand 3	C	673	676	anti-parallel
Strand 4	C	666	668	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	614	618	first strand
Strand 2	C	624	628	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	637	641	first strand
Strand 2	C	705	712	anti-parallel
Strand 3	C	695	702	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	688	689	first strand
Strand 2	C	723	724	parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	154	first strand
Strand 2	D	161	167	anti-parallel
Strand 3	D	171	176	anti-parallel
Strand 4	D	181	187	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	193	199	first strand
Strand 2	D	202	210	anti-parallel
Strand 3	D	215	219	anti-parallel
Strand 4	D	225	228	anti-parallel
Strand 5	D	292	293	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	239	244	first strand
Strand 2	D	250	255	anti-parallel
Strand 3	D	260	264	anti-parallel
Strand 4	D	299	301	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	311	315	first strand
Strand 2	D	318	322	anti-parallel
Strand 3	D	329	333	anti-parallel
Strand 4	D	350	354	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	427	428	first strand
Strand 2	D	434	435	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WG6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WG6