Analysis of interatomic Contacts of Structural Units in PDB entry:
5WGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WGS entry

There is 1 chain in PDB entry 5WGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3ALA 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 5WGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 17Right-handed alpha
Helix 2
AA2
A
19 26Right-handed alpha
Helix 3
AA3
A
46 60Right-handed alpha
Helix 4
AA4
A
84 94Right-handed alpha
Helix 5
AA5
A
97 105Right-handed alpha
Helix 6
AA6
A
143 157Right-handed alpha
Helix 7
AA7
A
207 211Right-handed 310
Helix 8
AA8
A
213 217Right-handed 310
Helix 9
AA9
A
276 294Right-handed alpha
Helix 10
AB1
A
296 300Right-handed 310
Helix 11
AB2
A
302 310Right-handed alpha
Helix 12
AB3
A
334 338Right-handed 310
Helix 13
AB4
A
340 353Right-handed alpha
Helix 14
AB5
A
353 361Right-handed alpha
Helix 15
AB6
A
398 400Right-handed 310
Helix 16
AB7
A
409 414Right-handed alpha
Helix 17
AB8
A
415 434Right-handed alpha
Helix 18
AB9
A
437 449Right-handed alpha
Helix 19
AC1
A
449 474Right-handed alpha
Helix 20
AC2
A
478 483Right-handed alpha
Helix 21
AC3
A
483 493Right-handed alpha
Helix 22
AC4
A
496 500Right-handed 310
Helix 23
AC5
A
504 511Right-handed alpha
Helix 24
AC6
A
512 516Right-handed 310
Helix 25
AC7
A
518 533Right-handed alpha
Helix 26
AC8
A
542 563Right-handed alpha
Helix 27
AC9
A
569 574Right-handed alpha
Helix 28
AD1
A
621 626Right-handed 310
Helix 29
AD2
A
634 645Right-handed alpha
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There are 6 sheets in PDB entry 5WGS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
66 69parallel
Strand 3
A
40 43parallel
Strand 4
A
202 205parallel
Strand 5
A
394 396parallel
Strand 6
A
390 391anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 108first strand
Strand 2
A
139 141anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 130first strand
Strand 2
A
110 116anti-parallel
Strand 3
A
254 259parallel
Strand 4
A
262 271anti-parallel
Strand 5
A
315 325anti-parallel
Strand 6
A
228 236anti-parallel
Strand 7
A
376 380anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
182 187anti-parallel
Strand 3
A
196 200anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
384 385first strand
Strand 2
A
402 403anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 596first strand
Strand 2
A
603 605anti-parallel
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