Analysis of interatomic Contacts of Structural Units in PDB entry:
5WHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WHZ entry

There are 2 chains in PDB entry 5WHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ASP 2GLY 337
H
 GLU 1SER 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5WHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
143 147Right-handed 310
Helix 2
AA2
L
196 200Right-handed 310
Helix 3
AA3
L
308 312Right-handed alpha
Helix 4
AA4
H
370 373Right-handed 310
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There are 16 sheets in PDB entry 5WHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
5 8first strand
Strand 2
L
19 26anti-parallel
Strand 3
L
76 82anti-parallel
Strand 4
L
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
11 14first strand
Strand 2
L
108 112parallel
Strand 3
L
90 96anti-parallel
Strand 4
L
39 44anti-parallel
Strand 5
L
51 55anti-parallel
Strand 6
L
59 60anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
127 131first strand
Strand 2
L
222 227parallel
Strand 3
L
202 207anti-parallel
Strand 4
L
151 155anti-parallel
Strand 5
L
162 165anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
127 131first strand
Strand 2
L
222 227parallel
Strand 3
L
202 207anti-parallel
Strand 4
L
217 218anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
136 141first strand
Strand 2
L
187 192anti-parallel
Strand 3
L
179 184anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
240 243first strand
Strand 2
L
254 262anti-parallel
Strand 3
L
299 307anti-parallel
Strand 4
L
284 285anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
270 274first strand
Strand 2
L
318 322anti-parallel
Strand 3
L
330 333anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
17 25anti-parallel
Strand 3
H
80 86anti-parallel
Strand 4
H
70 75anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
125 129parallel
Strand 3
H
94 104anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 51anti-parallel
Strand 6
H
60 62anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
125 129parallel
Strand 3
H
94 104anti-parallel
Strand 4
H
115 121anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
141 142first strand
Strand 2
H
154 159anti-parallel
Strand 3
H
214 219anti-parallel
Strand 4
H
204 209anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
146 148first strand
Strand 2
H
271 275parallel
Strand 3
H
228 235anti-parallel
Strand 4
H
169 176anti-parallel
Strand 5
H
180 187anti-parallel
Strand 6
H
194 196anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
146 148first strand
Strand 2
H
271 275parallel
Strand 3
H
228 235anti-parallel
Strand 4
H
266 267anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
237 241first strand
Strand 2
H
257 261anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
308 314first strand
Strand 2
H
345 351anti-parallel
Strand 3
H
332 339anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
320 323first strand
Strand 2
H
365 369anti-parallel
Strand 3
H
374 378anti-parallel
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