Analysis of interatomic Contacts of Structural Units in PDB entry:
5WIC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WIC entry

There are 4 chains in PDB entry 5WIC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 88GLU 230
B
 ARG 89GLU 230
C
 TYR 94GLU 230
D
 TYR 94GLU 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 5WIC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 112Right-handed alpha
Helix 2
AA2
A
117 128Right-handed alpha
Helix 3
AA3
A
130 139Right-handed alpha
Helix 4
AA4
A
140 142Right-handed 310
Helix 5
AA5
A
146 151Right-handed alpha
Helix 6
AA6
A
168 170Right-handed 310
Helix 7
AA7
A
209 214Right-handed alpha
Helix 8
AA8
B
95 112Right-handed alpha
Helix 9
AA9
B
117 128Right-handed alpha
Helix 10
AB1
B
130 139Right-handed alpha
Helix 11
AB2
B
140 142Right-handed 310
Helix 12
AB3
B
146 152Right-handed alpha
Helix 13
AB4
B
168 170Right-handed 310
Helix 14
AB5
B
209 216Right-handed alpha
Helix 15
AB6
C
95 111Right-handed alpha
Helix 16
AB7
C
117 128Right-handed alpha
Helix 17
AB8
C
130 139Right-handed alpha
Helix 18
AB9
C
140 141Right-handed 310
Helix 19
AC1
C
142 145Right-handed 310
Helix 20
AC2
C
146 152Right-handed alpha
Helix 21
AC3
C
168 170Right-handed 310
Helix 22
AC4
C
211 215Right-handed 310
Helix 23
AC5
D
95 112Right-handed alpha
Helix 24
AC6
D
114 116Right-handed 310
Helix 25
AC7
D
117 128Right-handed alpha
Helix 26
AC8
D
130 138Right-handed alpha
Helix 27
AC9
D
139 142Right-handed 310
Helix 28
AD1
D
146 152Right-handed alpha
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There are 4 sheets in PDB entry 5WIC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 167first strand
Strand 2
A
172 183anti-parallel
Strand 3
A
193 203anti-parallel
Strand 4
A
220 229anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 167first strand
Strand 2
B
172 183anti-parallel
Strand 3
B
193 203anti-parallel
Strand 4
B
220 229anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 167first strand
Strand 2
C
172 183anti-parallel
Strand 3
C
193 203anti-parallel
Strand 4
C
220 229anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
155 167first strand
Strand 2
D
172 183anti-parallel
Strand 3
D
193 203anti-parallel
Strand 4
D
220 229anti-parallel
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