Analysis of interatomic Contacts of Structural Units in PDB entry:
5WIE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WIE entry

There are 4 chains in PDB entry 5WIE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 36	SER 361
B	ASP 28	THR 417
G	LEU 36	SER 361
H	ASP 28	THR 417

There are 72 helices in PDB entry 5WIE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	79	Right-handed alpha
Helix 2	AA2	A	89	92	Right-handed 310
Helix 3	AA3	A	93	107	Right-handed alpha
Helix 4	AA4	A	109	113	Right-handed 310
Helix 5	AA5	A	125	129	Right-handed 310
Helix 6	AA6	A	132	148	Right-handed alpha
Helix 7	AA7	A	165	179	Right-handed alpha
Helix 8	AA8	A	191	205	Right-handed alpha
Helix 9	AA9	A	222	228	Right-handed alpha
Helix 10	AB1	A	228	237	Right-handed alpha
Helix 11	AB2	A	246	253	Right-handed 310
Helix 12	AB3	A	263	267	Right-handed 310
Helix 13	AB4	A	270	279	Right-handed alpha
Helix 14	AB5	A	279	299	Right-handed alpha
Helix 15	AB6	A	302	312	Right-handed alpha
Helix 16	AB7	A	326	335	Right-handed alpha
Helix 17	AB8	A	335	340	Right-handed alpha
Helix 18	AB9	A	341	343	Right-handed 310
Helix 19	AC1	A	344	356	Right-handed alpha
Helix 20	AC2	B	48	52	Right-handed alpha
Helix 21	AC3	B	61	66	Right-handed alpha
Helix 22	AC4	B	84	95	Right-handed alpha
Helix 23	AC5	B	105	116	Right-handed alpha
Helix 24	AC6	B	119	130	Right-handed alpha
Helix 25	AC7	B	143	155	Right-handed alpha
Helix 26	AC8	B	159	183	Right-handed alpha
Helix 27	AC9	B	185	190	Right-handed alpha
Helix 28	AD1	B	201	211	Right-handed alpha
Helix 29	AD2	B	220	244	Right-handed alpha
Helix 30	AD3	B	253	262	Right-handed alpha
Helix 31	AD4	B	263	275	Right-handed alpha
Helix 32	AD5	B	278	284	Right-handed alpha
Helix 33	AD6	B	285	296	Right-handed alpha
Helix 34	AD7	B	297	306	Right-handed 310
Helix 35	AD8	B	307	348	Right-handed alpha
Helix 36	AD9	B	360	369	Right-handed alpha
Helix 37	AE1	B	380	400	Right-handed alpha
Helix 38	AE2	B	400	415	Right-handed alpha
Helix 39	AE3	G	65	79	Right-handed alpha
Helix 40	AE4	G	89	92	Right-handed 310
Helix 41	AE5	G	93	107	Right-handed alpha
Helix 42	AE6	G	109	113	Right-handed 310
Helix 43	AE7	G	125	129	Right-handed 310
Helix 44	AE8	G	132	148	Right-handed alpha
Helix 45	AE9	G	165	179	Right-handed alpha
Helix 46	AF1	G	191	206	Right-handed alpha
Helix 47	AF2	G	222	227	Right-handed alpha
Helix 48	AF3	G	227	237	Right-handed alpha
Helix 49	AF4	G	246	257	Right-handed 310
Helix 50	AF5	G	263	267	Right-handed 310
Helix 51	AF6	G	270	279	Right-handed alpha
Helix 52	AF7	G	279	300	Right-handed alpha
Helix 53	AF8	G	302	312	Right-handed alpha
Helix 54	AF9	G	326	335	Right-handed alpha
Helix 55	AG1	G	335	340	Right-handed alpha
Helix 56	AG2	G	344	356	Right-handed alpha
Helix 57	AG3	H	48	52	Right-handed alpha
Helix 58	AG4	H	61	66	Right-handed alpha
Helix 59	AG5	H	81	95	Right-handed alpha
Helix 60	AG6	H	105	116	Right-handed alpha
Helix 61	AG7	H	119	131	Right-handed alpha
Helix 62	AG8	H	146	155	Right-handed alpha
Helix 63	AG9	H	159	183	Right-handed alpha
Helix 64	AH1	H	221	242	Right-handed alpha
Helix 65	AH2	H	253	270	Right-handed alpha
Helix 66	AH3	H	286	296	Right-handed alpha
Helix 67	AH4	H	297	306	Right-handed 310
Helix 68	AH5	H	307	320	Right-handed alpha
Helix 69	AH6	H	320	346	Right-handed alpha
Helix 70	AH7	H	356	369	Right-handed alpha
Helix 71	AH8	H	380	400	Right-handed alpha
Helix 72	AH9	H	401	416	Right-handed alpha

There are 6 sheets in PDB entry 5WIE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	41	first strand
Strand 2	A	48	50	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	55	first strand
Strand 2	A	83	87	parallel
Strand 3	A	114	119	parallel
Strand 4	A	152	157	parallel
Strand 5	A	182	188	parallel
Strand 6	A	212	214	parallel
Strand 7	A	239	242	parallel
Strand 8	A	317	322	parallel
Strand 9	A	52	55	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	47	first strand
Strand 2	B	34	39	anti-parallel
Strand 3	B	75	78	parallel
Strand 4	B	69	70	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	41	first strand
Strand 2	G	48	50	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	52	55	first strand
Strand 2	G	83	85	parallel
Strand 3	G	114	119	parallel
Strand 4	G	152	157	parallel
Strand 5	G	182	188	parallel
Strand 6	G	212	216	parallel
Strand 7	G	239	243	parallel
Strand 8	G	317	322	parallel
Strand 9	G	52	55	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	42	47	first strand
Strand 2	H	34	39	anti-parallel
Strand 3	H	75	78	parallel
Strand 4	H	69	70	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WIE

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WIE