Analysis of interatomic Contacts of Structural Units in PDB entry:
5WIR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WIR entry

There are 4 chains in PDB entry 5WIR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 ILE 645ARG 651
B
 SER 61GLU 265
C
 LYS 644LEU 655
A
 SER 61GLU 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5WIR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
63 93Right-handed alpha
Helix 2
AA2
B
94 109Right-handed alpha
Helix 3
AA3
B
110 112Right-handed 310
Helix 4
AA4
B
116 134Right-handed alpha
Helix 5
AA5
B
149 159Right-handed alpha
Helix 6
AA6
B
166 187Right-handed alpha
Helix 7
AA7
B
189 202Right-handed alpha
Helix 8
AA8
B
210 220Right-handed alpha
Helix 9
AA9
B
225 231Right-handed alpha
Helix 10
AB1
B
232 252Right-handed alpha
Helix 11
AB2
B
254 265Right-handed alpha
Helix 12
AB3
A
63 93Right-handed alpha
Helix 13
AB4
A
94 112Right-handed alpha
Helix 14
AB5
A
116 134Right-handed alpha
Helix 15
AB6
A
149 159Right-handed alpha
Helix 16
AB7
A
165 187Right-handed alpha
Helix 17
AB8
A
189 202Right-handed alpha
Helix 18
AB9
A
210 221Right-handed alpha
Helix 19
AC1
A
226 231Right-handed alpha
Helix 20
AC2
A
232 252Right-handed alpha
Helix 21
AC3
A
254 265Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5WIR.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
650 651first strand
Strand 2
A
140 141anti-parallel
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