Analysis of interatomic Contacts of Structural Units in PDB entry:
5WIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WIX entry

There is 1 chain in PDB entry 5WIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ASN 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 5WIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 26Right-handed alpha
Helix 2
AA2
A
135 143Right-handed alpha
Helix 3
AA3
A
145 152Right-handed 310
Helix 4
AA4
A
165 168Right-handed 310
Helix 5
AA5
A
207 211Right-handed 310
Helix 6
AA6
A
222 230Right-handed alpha
Helix 7
AA7
A
230 236Right-handed alpha
Helix 8
AA8
A
352 374Right-handed alpha
Helix 9
AA9
A
381 387Right-handed alpha
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There are 7 sheets in PDB entry 5WIX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 178first strand
Strand 2
A
186 193anti-parallel
Strand 3
A
8 13anti-parallel
Strand 4
A
217 221anti-parallel
Strand 5
A
409 415anti-parallel
Strand 6
A
397 405anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
41 53anti-parallel
Strand 3
A
61 74anti-parallel
Strand 4
A
77 79anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 36first strand
Strand 2
A
41 53anti-parallel
Strand 3
A
61 74anti-parallel
Strand 4
A
87 90anti-parallel
Strand 5
A
121 125anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
103 108anti-parallel
Strand 3
A
157 160anti-parallel
Strand 4
A
390 392anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
258 262anti-parallel
Strand 3
A
281 290anti-parallel
Strand 4
A
266 267anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
258 262anti-parallel
Strand 3
A
281 290anti-parallel
Strand 4
A
294 305anti-parallel
Strand 5
A
308 326anti-parallel
Strand 6
A
331 346anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 273first strand
Strand 2
A
276 278anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il