Analysis of interatomic Contacts of Structural Units in PDB entry:
5WJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WJS entry

There are 2 chains in PDB entry 5WJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14ALA 271
B
 ARG 14ALA 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5WJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
24 28Right-handed 310
Helix 3
AA3
A
39 52Right-handed alpha
Helix 4
AA4
A
62 73Right-handed alpha
Helix 5
AA5
A
89 105Right-handed alpha
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
126 138Right-handed alpha
Helix 8
AA8
A
138 156Right-handed alpha
Helix 9
AA9
A
175 197Right-handed alpha
Helix 10
AB1
A
213 220Right-handed alpha
Helix 11
AB2
A
222 233Right-handed alpha
Helix 12
AB3
A
240 253Right-handed alpha
Helix 13
AB4
A
254 257Right-handed 310
Helix 14
AB5
B
14 18Right-handed 310
Helix 15
AB6
B
24 28Right-handed 310
Helix 16
AB7
B
39 52Right-handed alpha
Helix 17
AB8
B
62 73Right-handed alpha
Helix 18
AB9
B
89 105Right-handed alpha
Helix 19
AC1
B
121 125Right-handed 310
Helix 20
AC2
B
126 138Right-handed alpha
Helix 21
AC3
B
138 156Right-handed alpha
Helix 22
AC4
B
175 197Right-handed alpha
Helix 23
AC5
B
213 220Right-handed alpha
Helix 24
AC6
B
222 233Right-handed alpha
Helix 25
AC7
B
240 253Right-handed alpha
Helix 26
AC8
B
254 257Right-handed 310
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There are 2 sheets in PDB entry 5WJS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
55 60parallel
Strand 3
A
31 35parallel
Strand 4
A
109 112parallel
Strand 5
A
158 163parallel
Strand 6
A
201 208parallel
Strand 7
A
263 266parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 84first strand
Strand 2
B
55 60parallel
Strand 3
B
31 35parallel
Strand 4
B
109 112parallel
Strand 5
B
158 163parallel
Strand 6
B
201 208parallel
Strand 7
B
263 266parallel
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