Analysis of interatomic Contacts of Structural Units in PDB entry:
5WL2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WL2 entry

There are 4 chains in PDB entry 5WL2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
 GLN 1PRO 221
L
 VAL 1THR 211
A
 GLN 1PRO 221
B
 VAL 1THR 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5WL2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
H
53 56Right-handed 310
Helix 2
AA2
H
62 65Right-handed 310
Helix 3
AA3
H
87 91Right-handed 310
Helix 4
AA4
H
135 137Right-handed 310
Helix 5
AA5
H
164 166Right-handed 310
Helix 6
AA6
H
195 197Right-handed 310
Helix 7
AA7
H
209 212Right-handed 310
Helix 8
AA8
L
26 30Right-handed 310
Helix 9
AA9
L
78 82Right-handed 310
Helix 10
AB1
L
123 129Right-handed alpha
Helix 11
AB2
L
183 190Right-handed alpha
Helix 12
AB3
A
53 56Right-handed 310
Helix 13
AB4
A
62 65Right-handed 310
Helix 14
AB5
A
87 91Right-handed 310
Helix 15
AB6
A
135 137Right-handed 310
Helix 16
AB7
A
164 166Right-handed 310
Helix 17
AB8
A
195 197Right-handed 310
Helix 18
AB9
A
209 212Right-handed 310
Helix 19
AC1
B
26 30Right-handed 310
Helix 20
AC2
B
78 82Right-handed 310
Helix 21
AC3
B
123 129Right-handed alpha
Helix 22
AC4
B
183 190Right-handed alpha
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There are 24 sheets in PDB entry 5WL2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 52anti-parallel
Strand 6
H
57 60anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
108 111anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
171 173anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
139 140first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
177 178anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
159 162first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
7 10first strand
Strand 2
L
103 107parallel
Strand 3
L
84 91anti-parallel
Strand 4
L
32 37anti-parallel
Strand 5
L
44 47anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
7 10first strand
Strand 2
L
103 107parallel
Strand 3
L
84 91anti-parallel
Strand 4
L
96 99anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
16 21first strand
Strand 2
L
69 74anti-parallel
Strand 3
L
61 66anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
116 120first strand
Strand 2
L
132 141anti-parallel
Strand 3
L
174 182anti-parallel
Strand 4
L
161 163anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
116 120first strand
Strand 2
L
132 141anti-parallel
Strand 3
L
174 182anti-parallel
Strand 4
L
167 168anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
155 157first strand
Strand 2
L
147 152anti-parallel
Strand 3
L
193 199anti-parallel
Strand 4
L
202 208anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
18 24anti-parallel
Strand 3
A
78 83anti-parallel
Strand 4
A
68 73anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
115 119parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 52anti-parallel
Strand 6
A
57 60anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
115 119parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
108 111anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 132first strand
Strand 2
A
143 153anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
171 173anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 140first strand
Strand 2
A
143 153anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
177 178anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
203 208anti-parallel
Strand 3
A
213 218anti-parallel
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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
103 107parallel
Strand 3
B
84 91anti-parallel
Strand 4
B
32 37anti-parallel
Strand 5
B
44 47anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
103 107parallel
Strand 3
B
84 91anti-parallel
Strand 4
B
96 99anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 21first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
61 66anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
132 141anti-parallel
Strand 3
B
174 182anti-parallel
Strand 4
B
161 163anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
132 141anti-parallel
Strand 3
B
174 182anti-parallel
Strand 4
B
167 168anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 157first strand
Strand 2
B
147 152anti-parallel
Strand 3
B
193 199anti-parallel
Strand 4
B
202 208anti-parallel
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