Analysis of interatomic Contacts of Structural Units in PDB entry:
5WL6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WL6 entry

There are 2 chains in PDB entry 5WL6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5MET 212
B
 LYS 5MET 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 5WL6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 59Right-handed alpha
Helix 2
AA2
A
60 65Right-handed 310
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
75 85Right-handed alpha
Helix 5
AA5
A
101 119Right-handed alpha
Helix 6
AA6
A
123 139Right-handed alpha
Helix 7
AA7
A
178 191Right-handed alpha
Helix 8
AA8
A
196 211Right-handed alpha
Helix 9
AA9
B
53 59Right-handed alpha
Helix 10
AB1
B
60 65Right-handed 310
Helix 11
AB2
B
68 74Right-handed alpha
Helix 12
AB3
B
75 85Right-handed alpha
Helix 13
AB4
B
101 119Right-handed alpha
Helix 14
AB5
B
123 139Right-handed alpha
Helix 15
AB6
B
178 191Right-handed alpha
Helix 16
AB7
B
196 212Right-handed alpha
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There are 6 sheets in PDB entry 5WL6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
11 13anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
26 38anti-parallel
Strand 3
A
41 52anti-parallel
Strand 4
A
89 95anti-parallel
Strand 5
A
147 154anti-parallel
Strand 6
A
157 163anti-parallel
Strand 7
A
174 177anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
141 142anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 8first strand
Strand 2
B
11 13anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
26 38anti-parallel
Strand 3
B
41 52anti-parallel
Strand 4
B
89 95anti-parallel
Strand 5
B
147 154anti-parallel
Strand 6
B
157 163anti-parallel
Strand 7
B
174 177anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
141 142anti-parallel
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