Analysis of interatomic Contacts of Structural Units in PDB entry:
5WLH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WLH entry

There are 2 chains in PDB entry 5WLH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 14VAL 1378
B
 G -29 G 14
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 73 helices in PDB entry 5WLH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 62Right-handed alpha
Helix 2
AA2
A
79 94Right-handed alpha
Helix 3
AA3
A
99 105Right-handed alpha
Helix 4
AA4
A
105 110Right-handed alpha
Helix 5
AA5
A
111 128Right-handed alpha
Helix 6
AA6
A
135 140Right-handed 310
Helix 7
AA7
A
142 153Right-handed alpha
Helix 8
AA8
A
154 164Right-handed alpha
Helix 9
AA9
A
171 183Right-handed alpha
Helix 10
AB1
A
184 188Right-handed 310
Helix 11
AB2
A
189 204Right-handed alpha
Helix 12
AB3
A
214 219Right-handed alpha
Helix 13
AB4
A
219 228Right-handed alpha
Helix 14
AB5
A
229 242Right-handed alpha
Helix 15
AB6
A
264 285Right-handed alpha
Helix 16
AB7
A
288 309Right-handed alpha
Helix 17
AB8
A
312 316Right-handed 310
Helix 18
AB9
A
323 333Right-handed alpha
Helix 19
AC1
A
353 386Right-handed alpha
Helix 20
AC2
A
394 415Right-handed alpha
Helix 21
AC3
A
421 424Right-handed 310
Helix 22
AC4
A
425 456Right-handed alpha
Helix 23
AC5
A
457 461Right-handed 310
Helix 24
AC6
A
474 478Right-handed 310
Helix 25
AC7
A
482 515Right-handed alpha
Helix 26
AC8
A
523 527Right-handed 310
Helix 27
AC9
A
545 550Right-handed 310
Helix 28
AD1
A
552 554Right-handed 310
Helix 29
AD2
A
555 562Right-handed alpha
Helix 30
AD3
A
563 565Right-handed 310
Helix 31
AD4
A
566 571Right-handed 310
Helix 32
AD5
A
574 579Right-handed alpha
Helix 33
AD6
A
584 600Right-handed alpha
Helix 34
AD7
A
617 630Right-handed alpha
Helix 35
AD8
A
631 643Right-handed alpha
Helix 36
AD9
A
644 648Right-handed 310
Helix 37
AE1
A
650 663Right-handed alpha
Helix 38
AE2
A
674 679Right-handed alpha
Helix 39
AE3
A
680 682Right-handed 310
Helix 40
AE4
A
683 690Right-handed alpha
Helix 41
AE5
A
705 728Right-handed alpha
Helix 42
AE6
A
732 743Right-handed alpha
Helix 43
AE7
A
783 797Right-handed alpha
Helix 44
AE8
A
801 811Right-handed alpha
Helix 45
AE9
A
840 859Right-handed alpha
Helix 46
AF1
A
860 864Right-handed 310
Helix 47
AF2
A
872 876Right-handed 310
Helix 48
AF3
A
879 883Right-handed 310
Helix 49
AF4
A
887 896Right-handed alpha
Helix 50
AF5
A
897 909Right-handed alpha
Helix 51
AF6
A
911 939Right-handed alpha
Helix 52
AF7
A
957 972Right-handed alpha
Helix 53
AF8
A
977 981Right-handed 310
Helix 54
AF9
A
984 993Right-handed alpha
Helix 55
AG1
A
1004 1015Right-handed alpha
Helix 56
AG2
A
1035 1045Right-handed alpha
Helix 57
AG3
A
1046 1054Right-handed alpha
Helix 58
AG4
A
1058 1073Right-handed alpha
Helix 59
AG5
A
1075 1079Right-handed 310
Helix 60
AG6
A
1083 1101Right-handed alpha
Helix 61
AG7
A
1102 1143Right-handed alpha
Helix 62
AG8
A
1149 1153Right-handed alpha
Helix 63
AG9
A
1167 1178Right-handed alpha
Helix 64
AH1
A
1201 1214Right-handed alpha
Helix 65
AH2
A
1226 1231Right-handed alpha
Helix 66
AH3
A
1232 1234Right-handed 310
Helix 67
AH4
A
1235 1248Right-handed alpha
Helix 68
AH5
A
1250 1255Right-handed alpha
Helix 69
AH6
A
1258 1270Right-handed alpha
Helix 70
AH7
A
1274 1279Right-handed alpha
Helix 71
AH8
A
1280 1292Right-handed alpha
Helix 72
AH9
A
1353 1366Right-handed alpha
Helix 73
AI1
A
1371 1376Right-handed alpha
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There are 10 sheets in PDB entry 5WLH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 25first strand
Strand 2
A
30 36anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 249first strand
Strand 2
A
255 257anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 469first strand
Strand 2
A
1163 1166parallel
Strand 3
A
1154 1157anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
951 952first strand
Strand 2
A
955 956anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1016 1018first strand
Strand 2
A
1021 1022anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1027 1028first strand
Strand 2
A
1031 1032anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1184 1186first strand
Strand 2
A
1193 1195anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1294 1296first strand
Strand 2
A
1333 1335anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1298 1307first strand
Strand 2
A
1318 1327anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1337 1341first strand
Strand 2
A
1346 1350anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il