Analysis of interatomic Contacts of Structural Units in PDB entry:
5WNN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WNN entry

There are 2 chains in PDB entry 5WNN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22ALA 341
B
 ALA 22ALA 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5WNN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 47Right-handed alpha
Helix 2
AA2
A
57 67Right-handed alpha
Helix 3
AA3
A
80 88Right-handed alpha
Helix 4
AA4
A
117 125Right-handed alpha
Helix 5
AA5
A
133 138Right-handed alpha
Helix 6
AA6
A
159 173Right-handed alpha
Helix 7
AA7
A
173 180Right-handed alpha
Helix 8
AA8
A
195 207Right-handed alpha
Helix 9
AA9
A
216 222Right-handed alpha
Helix 10
AB1
A
240 249Right-handed alpha
Helix 11
AB2
A
286 304Right-handed alpha
Helix 12
AB3
A
304 311Right-handed alpha
Helix 13
AB4
A
317 332Right-handed alpha
Helix 14
AB5
B
32 46Right-handed alpha
Helix 15
AB6
B
57 67Right-handed alpha
Helix 16
AB7
B
80 88Right-handed alpha
Helix 17
AB8
B
116 125Right-handed alpha
Helix 18
AB9
B
133 139Right-handed alpha
Helix 19
AC1
B
159 173Right-handed alpha
Helix 20
AC2
B
173 180Right-handed alpha
Helix 21
AC3
B
195 207Right-handed alpha
Helix 22
AC4
B
216 222Right-handed alpha
Helix 23
AC5
B
240 249Right-handed alpha
Helix 24
AC6
B
286 304Right-handed alpha
Helix 25
AC7
B
304 311Right-handed alpha
Helix 26
AC8
B
317 332Right-handed alpha
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There are 6 sheets in PDB entry 5WNN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 55first strand
Strand 2
A
24 28parallel
Strand 3
A
72 75parallel
Strand 4
A
273 281anti-parallel
Strand 5
A
89 103anti-parallel
Strand 6
A
225 226anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
151 155parallel
Strand 3
A
210 215parallel
Strand 4
A
89 103anti-parallel
Strand 5
A
314 315anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 116first strand
Strand 2
A
228 230parallel
Strand 3
A
236 237anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 54first strand
Strand 2
B
24 28parallel
Strand 3
B
72 75parallel
Strand 4
B
273 281anti-parallel
Strand 5
B
89 103anti-parallel
Strand 6
B
225 226anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 194first strand
Strand 2
B
151 155parallel
Strand 3
B
210 215parallel
Strand 4
B
89 103anti-parallel
Strand 5
B
314 315anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 115first strand
Strand 2
B
228 230parallel
Strand 3
B
236 237anti-parallel
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