Analysis of interatomic Contacts of Structural Units in PDB entry:
5WOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WOY entry

There is 1 chain in PDB entry 5WOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 5WOY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 34Right-handed 310
Helix 2
AA2
A
35 65Right-handed alpha
Helix 3
AA3
A
66 81Right-handed alpha
Helix 4
AA4
A
82 97Right-handed alpha
Helix 5
AA5
A
99 118Right-handed alpha
Helix 6
AA6
A
120 143Right-handed alpha
Helix 7
AA7
A
148 152Right-handed 310
Helix 8
AA8
A
164 169Right-handed alpha
Helix 9
AA9
A
186 197Right-handed alpha
Helix 10
AB1
A
207 212Right-handed alpha
Helix 11
AB2
A
232 248Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5WOY.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
226 229anti-parallel
Strand 3
A
217 221anti-parallel
Strand 4
A
11 19anti-parallel
Strand 5
A
156 160parallel
Strand 6
A
176 180parallel
Strand 7
A
201 203parallel
Strand 8
A
5 6anti-parallel
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