Analysis of interatomic Contacts of Structural Units in PDB entry:
5WP0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WP0 entry

There are 2 chains in PDB entry 5WP0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -2ASP 276
B
 PHE -2ASP 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5WP0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-2 10Right-handed alpha
Helix 2
AA2
A
16 35Right-handed alpha
Helix 3
AA3
A
47 68Right-handed alpha
Helix 4
AA4
A
87 98Right-handed alpha
Helix 5
AA5
A
108 123Right-handed alpha
Helix 6
AA6
A
132 160Right-handed alpha
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
194 205Right-handed alpha
Helix 9
AA9
A
208 214Right-handed alpha
Helix 10
AB1
A
236 245Right-handed alpha
Helix 11
AB2
A
250 264Right-handed alpha
Helix 12
AB3
A
264 269Right-handed alpha
Helix 13
AB4
B
1 10Right-handed alpha
Helix 14
AB5
B
16 35Right-handed alpha
Helix 15
AB6
B
47 68Right-handed alpha
Helix 16
AB7
B
87 98Right-handed alpha
Helix 17
AB8
B
108 124Right-handed alpha
Helix 18
AB9
B
132 160Right-handed alpha
Helix 19
AC1
B
168 175Right-handed alpha
Helix 20
AC2
B
194 206Right-handed alpha
Helix 21
AC3
B
208 213Right-handed alpha
Helix 22
AC4
B
236 245Right-handed alpha
Helix 23
AC5
B
250 263Right-handed alpha
Helix 24
AC6
B
264 269Right-handed alpha
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There are 2 sheets in PDB entry 5WP0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
74 79parallel
Strand 3
A
39 44parallel
Strand 4
A
162 163parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
74 79parallel
Strand 3
B
39 43parallel
Strand 4
B
161 163parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il