Analysis of interatomic Contacts of Structural Units in PDB entry:
5WP6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WP6 entry

There are 4 chains in PDB entry 5WP6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 7	LEU 1193
B	GLU 7	LEU 1193
C	GLU 7	LEU 1193
D	GLU 7	LEU 1193

There are180 helices in PDB entry 5WP6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	15	Right-handed alpha
Helix 2	AA2	A	98	109	Right-handed alpha
Helix 3	AA3	A	131	149	Right-handed alpha
Helix 4	AA4	A	162	177	Right-handed alpha
Helix 5	AA5	A	247	258	Right-handed alpha
Helix 6	AA6	A	283	295	Right-handed alpha
Helix 7	AA7	A	308	316	Right-handed alpha
Helix 8	AA8	A	328	333	Right-handed alpha
Helix 9	AA9	A	348	353	Right-handed alpha
Helix 10	AB1	A	372	384	Right-handed alpha
Helix 11	AB2	A	395	403	Right-handed alpha
Helix 12	AB3	A	406	415	Right-handed alpha
Helix 13	AB4	A	422	435	Right-handed alpha
Helix 14	AB5	A	437	447	Right-handed alpha
Helix 15	AB6	A	450	455	Right-handed alpha
Helix 16	AB7	A	456	466	Right-handed alpha
Helix 17	AB8	A	472	479	Right-handed alpha
Helix 18	AB9	A	559	569	Right-handed alpha
Helix 19	AC1	A	571	581	Right-handed alpha
Helix 20	AC2	A	584	600	Right-handed alpha
Helix 21	AC3	A	608	632	Right-handed alpha
Helix 22	AC4	A	634	644	Right-handed alpha
Helix 23	AC5	A	647	650	Right-handed 310
Helix 24	AC6	A	654	660	Right-handed alpha
Helix 25	AC7	A	663	669	Right-handed alpha
Helix 26	AC8	A	669	681	Right-handed alpha
Helix 27	AC9	A	689	699	Right-handed alpha
Helix 28	AD1	A	700	703	Right-handed 310
Helix 29	AD2	A	767	776	Right-handed alpha
Helix 30	AD3	A	778	803	Right-handed alpha
Helix 31	AD4	A	811	835	Right-handed alpha
Helix 32	AD5	A	851	860	Right-handed alpha
Helix 33	AD6	A	862	884	Right-handed alpha
Helix 34	AD7	A	887	905	Right-handed alpha
Helix 35	AD8	A	906	912	Right-handed 310
Helix 36	AD9	A	916	925	Right-handed alpha
Helix 37	AE1	A	929	953	Right-handed alpha
Helix 38	AE2	A	958	972	Right-handed alpha
Helix 39	AE3	A	1017	1034	Right-handed alpha
Helix 40	AE4	A	1034	1061	Right-handed alpha
Helix 41	AE5	A	1061	1072	Right-handed alpha
Helix 42	AE6	A	1079	1088	Right-handed alpha
Helix 43	AE7	A	1114	1142	Right-handed alpha
Helix 44	AE8	A	1146	1163	Right-handed alpha
Helix 45	AE9	A	1165	1192	Right-handed alpha
Helix 46	AF1	B	10	15	Right-handed alpha
Helix 47	AF2	B	98	109	Right-handed alpha
Helix 48	AF3	B	131	149	Right-handed alpha
Helix 49	AF4	B	162	177	Right-handed alpha
Helix 50	AF5	B	247	258	Right-handed alpha
Helix 51	AF6	B	283	295	Right-handed alpha
Helix 52	AF7	B	308	316	Right-handed alpha
Helix 53	AF8	B	328	333	Right-handed alpha
Helix 54	AF9	B	348	353	Right-handed alpha
Helix 55	AG1	B	372	384	Right-handed alpha
Helix 56	AG2	B	395	403	Right-handed alpha
Helix 57	AG3	B	406	415	Right-handed alpha
Helix 58	AG4	B	422	435	Right-handed alpha
Helix 59	AG5	B	437	447	Right-handed alpha
Helix 60	AG6	B	450	455	Right-handed alpha
Helix 61	AG7	B	456	466	Right-handed alpha
Helix 62	AG8	B	472	479	Right-handed alpha
Helix 63	AG9	B	559	569	Right-handed alpha
Helix 64	AH1	B	571	581	Right-handed alpha
Helix 65	AH2	B	584	600	Right-handed alpha
Helix 66	AH3	B	608	632	Right-handed alpha
Helix 67	AH4	B	634	644	Right-handed alpha
Helix 68	AH5	B	647	650	Right-handed 310
Helix 69	AH6	B	654	660	Right-handed alpha
Helix 70	AH7	B	663	669	Right-handed alpha
Helix 71	AH8	B	669	681	Right-handed alpha
Helix 72	AH9	B	689	699	Right-handed alpha
Helix 73	AI1	B	700	703	Right-handed 310
Helix 74	AI2	B	767	776	Right-handed alpha
Helix 75	AI3	B	778	803	Right-handed alpha
Helix 76	AI4	B	811	835	Right-handed alpha
Helix 77	AI5	B	851	860	Right-handed alpha
Helix 78	AI6	B	862	884	Right-handed alpha
Helix 79	AI7	B	887	905	Right-handed alpha
Helix 80	AI8	B	906	912	Right-handed 310
Helix 81	AI9	B	916	925	Right-handed alpha
Helix 82	AJ1	B	929	953	Right-handed alpha
Helix 83	AJ2	B	958	972	Right-handed alpha
Helix 84	AJ3	B	1017	1034	Right-handed alpha
Helix 85	AJ4	B	1034	1061	Right-handed alpha
Helix 86	AJ5	B	1061	1072	Right-handed alpha
Helix 87	AJ6	B	1079	1088	Right-handed alpha
Helix 88	AJ7	B	1114	1142	Right-handed alpha
Helix 89	AJ8	B	1146	1163	Right-handed alpha
Helix 90	AJ9	B	1165	1192	Right-handed alpha
Helix 91	AK1	C	10	15	Right-handed alpha
Helix 92	AK2	C	98	109	Right-handed alpha
Helix 93	AK3	C	131	149	Right-handed alpha
Helix 94	AK4	C	162	177	Right-handed alpha
Helix 95	AK5	C	247	258	Right-handed alpha
Helix 96	AK6	C	283	295	Right-handed alpha
Helix 97	AK7	C	308	316	Right-handed alpha
Helix 98	AK8	C	328	333	Right-handed alpha
Helix 99	AK9	C	348	353	Right-handed alpha
Helix 100	AL1	C	372	384	Right-handed alpha
Helix 101	AL2	C	395	403	Right-handed alpha
Helix 102	AL3	C	406	415	Right-handed alpha
Helix 103	AL4	C	422	435	Right-handed alpha
Helix 104	AL5	C	437	447	Right-handed alpha
Helix 105	AL6	C	450	455	Right-handed alpha
Helix 106	AL7	C	456	466	Right-handed alpha
Helix 107	AL8	C	472	479	Right-handed alpha
Helix 108	AL9	C	559	569	Right-handed alpha
Helix 109	AM1	C	571	581	Right-handed alpha
Helix 110	AM2	C	584	600	Right-handed alpha
Helix 111	AM3	C	608	632	Right-handed alpha
Helix 112	AM4	C	634	644	Right-handed alpha
Helix 113	AM5	C	647	650	Right-handed 310
Helix 114	AM6	C	654	660	Right-handed alpha
Helix 115	AM7	C	663	669	Right-handed alpha
Helix 116	AM8	C	669	681	Right-handed alpha
Helix 117	AM9	C	689	699	Right-handed alpha
Helix 118	AN1	C	700	703	Right-handed 310
Helix 119	AN2	C	767	776	Right-handed alpha
Helix 120	AN3	C	778	803	Right-handed alpha
Helix 121	AN4	C	811	835	Right-handed alpha
Helix 122	AN5	C	851	860	Right-handed alpha
Helix 123	AN6	C	862	884	Right-handed alpha
Helix 124	AN7	C	887	905	Right-handed alpha
Helix 125	AN8	C	906	912	Right-handed 310
Helix 126	AN9	C	916	925	Right-handed alpha
Helix 127	AO1	C	929	953	Right-handed alpha
Helix 128	AO2	C	958	972	Right-handed alpha
Helix 129	AO3	C	1017	1034	Right-handed alpha
Helix 130	AO4	C	1034	1061	Right-handed alpha
Helix 131	AO5	C	1061	1072	Right-handed alpha
Helix 132	AO6	C	1079	1088	Right-handed alpha
Helix 133	AO7	C	1114	1142	Right-handed alpha
Helix 134	AO8	C	1146	1163	Right-handed alpha
Helix 135	AO9	C	1165	1192	Right-handed alpha
Helix 136	AP1	D	10	15	Right-handed alpha
Helix 137	AP2	D	98	109	Right-handed alpha
Helix 138	AP3	D	131	149	Right-handed alpha
Helix 139	AP4	D	162	177	Right-handed alpha
Helix 140	AP5	D	247	258	Right-handed alpha
Helix 141	AP6	D	283	295	Right-handed alpha
Helix 142	AP7	D	308	316	Right-handed alpha
Helix 143	AP8	D	328	333	Right-handed alpha
Helix 144	AP9	D	348	353	Right-handed alpha
Helix 145	AQ1	D	372	384	Right-handed alpha
Helix 146	AQ2	D	395	403	Right-handed alpha
Helix 147	AQ3	D	406	415	Right-handed alpha
Helix 148	AQ4	D	422	435	Right-handed alpha
Helix 149	AQ5	D	437	447	Right-handed alpha
Helix 150	AQ6	D	450	455	Right-handed alpha
Helix 151	AQ7	D	456	466	Right-handed alpha
Helix 152	AQ8	D	472	479	Right-handed alpha
Helix 153	AQ9	D	559	569	Right-handed alpha
Helix 154	AR1	D	571	581	Right-handed alpha
Helix 155	AR2	D	584	600	Right-handed alpha
Helix 156	AR3	D	608	632	Right-handed alpha
Helix 157	AR4	D	634	644	Right-handed alpha
Helix 158	AR5	D	647	650	Right-handed 310
Helix 159	AR6	D	654	660	Right-handed alpha
Helix 160	AR7	D	663	669	Right-handed alpha
Helix 161	AR8	D	669	681	Right-handed alpha
Helix 162	AR9	D	689	699	Right-handed alpha
Helix 163	AS1	D	700	703	Right-handed 310
Helix 164	AS2	D	767	776	Right-handed alpha
Helix 165	AS3	D	778	803	Right-handed alpha
Helix 166	AS4	D	811	835	Right-handed alpha
Helix 167	AS5	D	851	860	Right-handed alpha
Helix 168	AS6	D	862	884	Right-handed alpha
Helix 169	AS7	D	887	905	Right-handed alpha
Helix 170	AS8	D	906	912	Right-handed 310
Helix 171	AS9	D	916	925	Right-handed alpha
Helix 172	AT1	D	929	953	Right-handed alpha
Helix 173	AT2	D	958	972	Right-handed alpha
Helix 174	AT3	D	1017	1034	Right-handed alpha
Helix 175	AT4	D	1034	1061	Right-handed alpha
Helix 176	AT5	D	1061	1072	Right-handed alpha
Helix 177	AT6	D	1079	1088	Right-handed alpha
Helix 178	AT7	D	1114	1142	Right-handed alpha
Helix 179	AT8	D	1146	1163	Right-handed alpha
Helix 180	AT9	D	1165	1192	Right-handed alpha

There are 16 sheets in PDB entry 5WP6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	17	first strand
Strand 2	A	70	71	anti-parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	78	first strand
Strand 2	A	88	94	anti-parallel
Strand 3	A	231	236	parallel
Strand 4	A	186	190	parallel
Strand 5	A	151	156	parallel
Strand 6	A	117	121	parallel
Strand 7	A	273	277	parallel
Strand 8	A	298	301	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	645	646	first strand
Strand 2	A	652	653	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1000	1001	first strand
Strand 2	A	1012	1013	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	17	first strand
Strand 2	B	70	71	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	78	first strand
Strand 2	B	88	94	anti-parallel
Strand 3	B	231	236	parallel
Strand 4	B	186	190	parallel
Strand 5	B	151	156	parallel
Strand 6	B	117	121	parallel
Strand 7	B	273	277	parallel
Strand 8	B	298	301	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	645	646	first strand
Strand 2	B	652	653	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1000	1001	first strand
Strand 2	B	1012	1013	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	16	17	first strand
Strand 2	C	70	71	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	78	first strand
Strand 2	C	88	94	anti-parallel
Strand 3	C	231	236	parallel
Strand 4	C	186	190	parallel
Strand 5	C	151	156	parallel
Strand 6	C	117	121	parallel
Strand 7	C	273	277	parallel
Strand 8	C	298	301	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	645	646	first strand
Strand 2	C	652	653	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1000	1001	first strand
Strand 2	C	1012	1013	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	16	17	first strand
Strand 2	D	70	71	anti-parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	78	first strand
Strand 2	D	88	94	anti-parallel
Strand 3	D	231	236	parallel
Strand 4	D	186	190	parallel
Strand 5	D	151	156	parallel
Strand 6	D	117	121	parallel
Strand 7	D	273	277	parallel
Strand 8	D	298	301	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	645	646	first strand
Strand 2	D	652	653	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1000	1001	first strand
Strand 2	D	1012	1013	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WP6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WP6