Analysis of interatomic Contacts of Structural Units in PDB entry:
5WQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WQ4 entry

There are 6 chains in PDB entry 5WQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET 1GLY 151
C
 LEU 435ASN 506
D
 ALA 439GLU 510
A
 LYS 6ARG 150
E
 GLN 438ASN 506
F
 GLU 434ILE 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5WQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
22 35Right-handed alpha
Helix 2
AA2
B
37 39Right-handed 310
Helix 3
AA3
B
98 111Right-handed alpha
Helix 4
AA4
B
113 115Right-handed 310
Helix 5
AA5
C
436 506Right-handed alpha
Helix 6
AA6
D
440 508Right-handed alpha
Helix 7
AA7
A
24 35Right-handed alpha
Helix 8
AA8
A
37 39Right-handed 310
Helix 9
AA9
A
55 59Right-handed 310
Helix 10
AB1
A
98 111Right-handed alpha
Helix 11
AB2
A
113 115Right-handed 310
Helix 12
AB3
E
439 505Right-handed alpha
Helix 13
AB4
F
435 509Right-handed alpha
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There are 4 sheets in PDB entry 5WQ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
66 71parallel
Strand 3
B
41 45anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 93first strand
Strand 2
B
77 82anti-parallel
Strand 3
B
142 147parallel
Strand 4
B
117 121anti-parallel
Strand 5
B
124 125anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
68 71anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
A
78 82anti-parallel
Strand 3
A
142 147parallel
Strand 4
A
117 121anti-parallel
Strand 5
A
124 125anti-parallel
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