Analysis of interatomic Contacts of Structural Units in PDB entry:
5WQS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WQS entry

There is 1 chain in PDB entry 5WQS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ASP 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5WQS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 12Right-handed 310
Helix 2
AA2
A
32 46Right-handed alpha
Helix 3
AA3
A
57 61Right-handed alpha
Helix 4
AA4
A
70 83Right-handed alpha
Helix 5
AA5
A
109 119Right-handed alpha
Helix 6
AA6
A
120 123Right-handed 310
Helix 7
AA7
A
137 141Right-handed 310
Helix 8
AA8
A
150 166Right-handed alpha
Helix 9
AA9
A
166 172Right-handed alpha
Helix 10
AB1
A
183 187Right-handed 310
Helix 11
AB2
A
194 198Right-handed 310
Helix 12
AB3
A
211 225Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
A
243 247Right-handed 310
Helix 15
AB6
A
254 257Right-handed 310
Helix 16
AB7
A
258 288Right-handed alpha
Helix 17
AB8
A
310 317Right-handed alpha
Helix 18
AB9
A
327 337Right-handed alpha
Helix 19
AC1
A
349 353Right-handed 310
Helix 20
AC2
A
354 358Right-handed 310
Helix 21
AC3
A
360 375Right-handed alpha
Helix 22
AC4
A
389 401Right-handed alpha
Helix 23
AC5
A
424 429Right-handed alpha
Helix 24
AC6
A
429 444Right-handed alpha
Helix 25
AC7
A
467 473Right-handed alpha
Helix 26
AC8
A
474 476Right-handed 310
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There are 2 sheets in PDB entry 5WQS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 18first strand
Strand 2
A
50 56parallel
Strand 3
A
86 92parallel
Strand 4
A
175 180parallel
Strand 5
A
293 297parallel
Strand 6
A
340 343parallel
Strand 7
A
379 382parallel
Strand 8
A
418 420parallel
Strand 9
A
15 18parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
131 132anti-parallel
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