Analysis of interatomic Contacts of Structural Units in PDB entry:
5WRG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WRG entry

There are 3 chains in PDB entry 5WRG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 261	THR 1058
B	THR 261	THR 1058
C	THR 261	THR 1058

There are 51 helices in PDB entry 5WRG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	281	290	Right-handed alpha
Helix 2	AA2	A	325	330	Right-handed alpha
Helix 3	AA3	A	351	357	Right-handed alpha
Helix 4	AA4	A	391	395	Right-handed 310
Helix 5	AA5	A	402	409	Right-handed alpha
Helix 6	AA6	A	603	609	Right-handed alpha
Helix 7	AA7	A	719	724	Right-handed alpha
Helix 8	AA8	A	728	734	Right-handed alpha
Helix 9	AA9	A	743	765	Right-handed alpha
Helix 10	AB1	A	798	806	Right-handed alpha
Helix 11	AB2	A	848	860	Right-handed alpha
Helix 12	AB3	A	880	891	Right-handed alpha
Helix 13	AB4	A	894	898	Right-handed 310
Helix 14	AB5	A	901	917	Right-handed alpha
Helix 15	AB6	A	927	949	Right-handed alpha
Helix 16	AB7	A	958	966	Right-handed alpha
Helix 17	AB8	A	970	1011	Right-handed alpha
Helix 18	AB9	B	281	290	Right-handed alpha
Helix 19	AC1	B	325	330	Right-handed alpha
Helix 20	AC2	B	351	357	Right-handed alpha
Helix 21	AC3	B	391	395	Right-handed 310
Helix 22	AC4	B	402	409	Right-handed alpha
Helix 23	AC5	B	603	609	Right-handed alpha
Helix 24	AC6	B	719	724	Right-handed alpha
Helix 25	AC7	B	728	734	Right-handed alpha
Helix 26	AC8	B	743	765	Right-handed alpha
Helix 27	AC9	B	798	806	Right-handed alpha
Helix 28	AD1	B	848	860	Right-handed alpha
Helix 29	AD2	B	880	891	Right-handed alpha
Helix 30	AD3	B	894	898	Right-handed 310
Helix 31	AD4	B	901	917	Right-handed alpha
Helix 32	AD5	B	927	949	Right-handed alpha
Helix 33	AD6	B	958	966	Right-handed alpha
Helix 34	AD7	B	970	1011	Right-handed alpha
Helix 35	AD8	C	281	290	Right-handed alpha
Helix 36	AD9	C	325	330	Right-handed alpha
Helix 37	AE1	C	351	357	Right-handed alpha
Helix 38	AE2	C	391	395	Right-handed 310
Helix 39	AE3	C	402	409	Right-handed alpha
Helix 40	AE4	C	603	609	Right-handed alpha
Helix 41	AE5	C	719	724	Right-handed alpha
Helix 42	AE6	C	728	734	Right-handed alpha
Helix 43	AE7	C	743	765	Right-handed alpha
Helix 44	AE8	C	798	806	Right-handed alpha
Helix 45	AE9	C	848	860	Right-handed alpha
Helix 46	AF1	C	880	891	Right-handed alpha
Helix 47	AF2	C	894	898	Right-handed 310
Helix 48	AF3	C	901	917	Right-handed alpha
Helix 49	AF4	C	927	949	Right-handed alpha
Helix 50	AF5	C	958	966	Right-handed alpha
Helix 51	AF6	C	970	1011	Right-handed alpha

There are 24 sheets in PDB entry 5WRG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	267	first strand
Strand 2	A	271	272	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	303	first strand
Strand 2	A	580	583	anti-parallel
Strand 3	A	595	598	anti-parallel
Strand 4	A	635	637	anti-parallel
Strand 5	A	629	630	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	344	first strand
Strand 2	A	383	389	anti-parallel
Strand 3	A	494	499	anti-parallel
Strand 4	A	418	424	anti-parallel
Strand 5	A	363	367	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	440	441	first strand
Strand 2	A	478	479	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	537	539	first strand
Strand 2	A	571	574	anti-parallel
Strand 3	A	561	562	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	700	701	first strand
Strand 2	A	1050	1051	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	704	710	first strand
Strand 2	A	1041	1047	anti-parallel
Strand 3	A	1033	1035	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	718	first strand
Strand 2	A	840	842	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	267	first strand
Strand 2	B	271	272	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	302	303	first strand
Strand 2	B	580	583	anti-parallel
Strand 3	B	595	598	anti-parallel
Strand 4	B	635	637	anti-parallel
Strand 5	B	629	630	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	344	first strand
Strand 2	B	383	389	anti-parallel
Strand 3	B	494	499	anti-parallel
Strand 4	B	418	424	anti-parallel
Strand 5	B	363	367	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	440	441	first strand
Strand 2	B	478	479	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	537	539	first strand
Strand 2	B	571	574	anti-parallel
Strand 3	B	561	562	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	701	first strand
Strand 2	B	1050	1051	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	704	710	first strand
Strand 2	B	1041	1047	anti-parallel
Strand 3	B	1033	1035	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	716	718	first strand
Strand 2	B	840	842	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	267	first strand
Strand 2	C	271	272	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	303	first strand
Strand 2	C	580	583	anti-parallel
Strand 3	C	595	598	anti-parallel
Strand 4	C	635	637	anti-parallel
Strand 5	C	629	630	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	344	first strand
Strand 2	C	383	389	anti-parallel
Strand 3	C	494	499	anti-parallel
Strand 4	C	418	424	anti-parallel
Strand 5	C	363	367	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	440	441	first strand
Strand 2	C	478	479	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	537	539	first strand
Strand 2	C	571	574	anti-parallel
Strand 3	C	561	562	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	701	first strand
Strand 2	C	1050	1051	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	704	710	first strand
Strand 2	C	1041	1047	anti-parallel
Strand 3	C	1033	1035	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	718	first strand
Strand 2	C	840	842	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WRG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WRG