Analysis of interatomic Contacts of Structural Units in PDB entry:
5WRR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WRR entry

There are 2 chains in PDB entry 5WRR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 89GLY 525
B
 SER 89PRO 526
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 5WRR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 98Right-handed alpha
Helix 2
AA2
A
99 103Right-handed 310
Helix 3
AA3
A
118 144Right-handed alpha
Helix 4
AA4
A
159 168Right-handed alpha
Helix 5
AA5
A
178 191Right-handed alpha
Helix 6
AA6
A
199 204Right-handed alpha
Helix 7
AA7
A
243 247Right-handed 310
Helix 8
AA8
A
251 255Right-handed 310
Helix 9
AA9
A
258 273Right-handed alpha
Helix 10
AB1
A
288 292Right-handed alpha
Helix 11
AB2
A
298 304Right-handed alpha
Helix 12
AB3
A
317 323Right-handed alpha
Helix 13
AB4
A
375 382Right-handed alpha
Helix 14
AB5
A
389 407Right-handed alpha
Helix 15
AB6
A
419 421Right-handed 310
Helix 16
AB7
A
442 445Right-handed 310
Helix 17
AB8
A
446 453Right-handed alpha
Helix 18
AB9
A
457 467Right-handed alpha
Helix 19
AC1
A
468 471Right-handed 310
Helix 20
AC2
A
472 482Right-handed alpha
Helix 21
AC3
A
491 517Right-handed alpha
Helix 22
AC4
A
517 521Right-handed alpha
Helix 23
AC5
B
90 98Right-handed alpha
Helix 24
AC6
B
99 103Right-handed 310
Helix 25
AC7
B
118 144Right-handed alpha
Helix 26
AC8
B
159 168Right-handed alpha
Helix 27
AC9
B
178 191Right-handed alpha
Helix 28
AD1
B
199 204Right-handed alpha
Helix 29
AD2
B
210 214Right-handed 310
Helix 30
AD3
B
251 255Right-handed 310
Helix 31
AD4
B
258 273Right-handed alpha
Helix 32
AD5
B
288 292Right-handed alpha
Helix 33
AD6
B
298 304Right-handed alpha
Helix 34
AD7
B
317 323Right-handed alpha
Helix 35
AD8
B
375 382Right-handed alpha
Helix 36
AD9
B
389 407Right-handed alpha
Helix 37
AE1
B
442 445Right-handed 310
Helix 38
AE2
B
446 453Right-handed alpha
Helix 39
AE3
B
457 467Right-handed alpha
Helix 40
AE4
B
468 471Right-handed 310
Helix 41
AE5
B
472 482Right-handed alpha
Helix 42
AE6
B
491 517Right-handed alpha
Helix 43
AE7
B
517 521Right-handed alpha
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There are 8 sheets in PDB entry 5WRR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 198first strand
Strand 2
A
224 228anti-parallel
Strand 3
A
233 238anti-parallel
Strand 4
A
335 342anti-parallel
Strand 5
A
281 287anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 307first strand
Strand 2
A
313 316anti-parallel
Strand 3
A
328 330anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 356first strand
Strand 2
A
413 417anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 456first strand
Strand 2
A
522 523parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 198first strand
Strand 2
B
224 228anti-parallel
Strand 3
B
233 238anti-parallel
Strand 4
B
335 342anti-parallel
Strand 5
B
281 287anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
305 307first strand
Strand 2
B
313 316anti-parallel
Strand 3
B
328 330anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 356first strand
Strand 2
B
413 417anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
455 456first strand
Strand 2
B
522 523parallel
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