Analysis of interatomic Contacts of Structural Units in PDB entry:
5WSL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WSL entry

There are 3 chains in PDB entry 5WSL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	TYR 282
B	ALA 1	TYR 282
C	ALA 1	TYR 282

There are 24 helices in PDB entry 5WSL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	14	Right-handed alpha
Helix 2	AA2	A	46	50	Right-handed 310
Helix 3	AA3	A	71	82	Right-handed alpha
Helix 4	AA4	A	107	121	Right-handed alpha
Helix 5	AA5	A	136	149	Right-handed alpha
Helix 6	AA6	A	163	165	Right-handed 310
Helix 7	AA7	A	222	241	Right-handed alpha
Helix 8	AA8	A	245	257	Right-handed alpha
Helix 9	AA9	B	7	14	Right-handed alpha
Helix 10	AB1	B	46	50	Right-handed 310
Helix 11	AB2	B	71	82	Right-handed alpha
Helix 12	AB3	B	107	121	Right-handed alpha
Helix 13	AB4	B	136	149	Right-handed alpha
Helix 14	AB5	B	163	165	Right-handed 310
Helix 15	AB6	B	222	241	Right-handed alpha
Helix 16	AB7	B	245	257	Right-handed alpha
Helix 17	AB8	C	7	14	Right-handed alpha
Helix 18	AB9	C	46	50	Right-handed 310
Helix 19	AC1	C	71	82	Right-handed alpha
Helix 20	AC2	C	106	121	Right-handed alpha
Helix 21	AC3	C	136	149	Right-handed alpha
Helix 22	AC4	C	163	165	Right-handed 310
Helix 23	AC5	C	222	241	Right-handed alpha
Helix 24	AC6	C	245	257	Right-handed alpha

There are 15 sheets in PDB entry 5WSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	4	first strand
Strand 2	A	23	25	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	58	first strand
Strand 2	A	92	97	parallel
Strand 3	A	34	39	parallel
Strand 4	A	125	129	parallel
Strand 5	A	152	156	parallel
Strand 6	A	176	181	parallel
Strand 7	A	199	202	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	106	first strand
Strand 2	B	278	281	anti-parallel
Strand 3	A	131	134	anti-parallel
Strand 4	A	167	168	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	206	209	first strand
Strand 2	A	217	220	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	258	259	first strand
Strand 2	A	272	273	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	23	25	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	58	first strand
Strand 2	B	92	97	parallel
Strand 3	B	34	39	parallel
Strand 4	B	125	129	parallel
Strand 5	B	152	156	parallel
Strand 6	B	176	181	parallel
Strand 7	B	199	202	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	106	first strand
Strand 2	C	278	281	anti-parallel
Strand 3	B	131	134	anti-parallel
Strand 4	B	167	168	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	206	209	first strand
Strand 2	B	217	220	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	258	259	first strand
Strand 2	B	272	273	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	4	first strand
Strand 2	C	23	25	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	58	first strand
Strand 2	C	92	97	parallel
Strand 3	C	34	39	parallel
Strand 4	C	125	129	parallel
Strand 5	C	152	156	parallel
Strand 6	C	176	181	parallel
Strand 7	C	199	202	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	134	first strand
Strand 2	C	167	168	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	206	209	first strand
Strand 2	C	217	220	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	258	259	first strand
Strand 2	C	272	273	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WSL

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WSL