Analysis of interatomic Contacts of Structural Units in PDB entry:
5WTG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WTG entry

There are 4 chains in PDB entry 5WTG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 1	CYS 212
B	GLU 1	ARG 221
C	ASP 1	CYS 212
D	GLU 1	ARG 221

There are 14 helices in PDB entry 5WTG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	78	82	Right-handed 310
Helix 2	AA2	A	119	124	Right-handed alpha
Helix 3	AA3	A	181	186	Right-handed alpha
Helix 4	AA4	B	28	32	Right-handed 310
Helix 5	AA5	B	87	91	Right-handed 310
Helix 6	AA6	B	167	169	Right-handed 310
Helix 7	AA7	C	78	82	Right-handed 310
Helix 8	AA8	C	119	124	Right-handed alpha
Helix 9	AA9	C	181	187	Right-handed alpha
Helix 10	AB1	C	210	212	Right-handed 310
Helix 11	AB2	D	28	32	Right-handed 310
Helix 12	AB3	D	87	91	Right-handed 310
Helix 13	AB4	D	164	166	Right-handed 310
Helix 14	AB5	D	167	169	Right-handed 310

There are 18 sheets in PDB entry 5WTG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	4	6	first strand
Strand 2	A	19	29	anti-parallel
Strand 3	A	61	74	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	10	13	first strand
Strand 2	A	100	104	parallel
Strand 3	A	84	89	anti-parallel
Strand 4	A	32	37	anti-parallel
Strand 5	A	44	48	anti-parallel
Strand 6	A	52	53	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	112	116	first strand
Strand 2	A	127	137	anti-parallel
Strand 3	A	171	180	anti-parallel
Strand 4	A	157	161	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	148	first strand
Strand 2	A	189	195	anti-parallel
Strand 3	A	203	208	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	7	first strand
Strand 2	B	18	25	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	68	73	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	115	119	parallel
Strand 3	B	92	101	anti-parallel
Strand 4	B	33	40	anti-parallel
Strand 5	B	44	51	anti-parallel
Strand 6	B	58	59	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	115	119	parallel
Strand 3	B	92	101	anti-parallel
Strand 4	B	106	111	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	132	first strand
Strand 2	B	143	153	anti-parallel
Strand 3	B	183	192	anti-parallel
Strand 4	B	171	178	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	162	first strand
Strand 2	B	201	207	anti-parallel
Strand 3	B	212	218	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	6	first strand
Strand 2	C	19	25	anti-parallel
Strand 3	C	69	74	anti-parallel
Strand 4	C	61	66	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	13	first strand
Strand 2	C	100	104	parallel
Strand 3	C	84	88	anti-parallel
Strand 4	C	33	37	anti-parallel
Strand 5	C	43	47	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	112	116	first strand
Strand 2	C	127	137	anti-parallel
Strand 3	C	171	180	anti-parallel
Strand 4	C	157	161	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	148	first strand
Strand 2	C	189	196	anti-parallel
Strand 3	C	203	208	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	115	119	parallel
Strand 3	D	92	101	anti-parallel
Strand 4	D	33	39	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	58	59	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	115	119	parallel
Strand 3	D	92	101	anti-parallel
Strand 4	D	106	111	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	128	132	first strand
Strand 2	D	143	153	anti-parallel
Strand 3	D	183	192	anti-parallel
Strand 4	D	171	178	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	162	first strand
Strand 2	D	201	207	anti-parallel
Strand 3	D	212	218	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WTG

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WTG