Analysis of interatomic Contacts of Structural Units in PDB entry:
5WTK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WTK entry

There are 2 chains in PDB entry 5WTK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 1383
B
 C 2 C 51
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5WTK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 64Right-handed alpha
Helix 2
AA2
A
66 75Right-handed alpha
Helix 3
AA3
A
183 209Right-handed alpha
Helix 4
AA4
A
220 231Right-handed alpha
Helix 5
AA5
A
234 251Right-handed alpha
Helix 6
AA6
A
253 263Right-handed alpha
Helix 7
AA7
A
272 283Right-handed alpha
Helix 8
AA8
A
290 305Right-handed alpha
Helix 9
AA9
A
319 335Right-handed alpha
Helix 10
AB1
A
338 346Right-handed alpha
Helix 11
AB2
A
349 365Right-handed alpha
Helix 12
AB3
A
366 378Right-handed alpha
Helix 13
AB4
A
379 394Right-handed alpha
Helix 14
AB5
A
398 412Right-handed alpha
Helix 15
AB6
A
421 451Right-handed alpha
Helix 16
AB7
A
459 464Right-handed alpha
Helix 17
AB8
A
464 494Right-handed alpha
Helix 18
AB9
A
501 532Right-handed alpha
Helix 19
AC1
A
563 572Right-handed alpha
Helix 20
AC2
A
576 580Right-handed 310
Helix 21
AC3
A
582 588Right-handed alpha
Helix 22
AC4
A
589 602Right-handed alpha
Helix 23
AC5
A
615 630Right-handed alpha
Helix 24
AC6
A
647 656Right-handed alpha
Helix 25
AC7
A
666 670Right-handed 310
Helix 26
AC8
A
672 687Right-handed alpha
Helix 27
AC9
A
698 720Right-handed alpha
Helix 28
AD1
A
731 741Right-handed alpha
Helix 29
AD2
A
749 762Right-handed alpha
Helix 30
AD3
A
768 789Right-handed alpha
Helix 31
AD4
A
790 794Right-handed 310
Helix 32
AD5
A
802 812Right-handed alpha
Helix 33
AD6
A
834 845Right-handed alpha
Helix 34
AD7
A
848 867Right-handed alpha
Helix 35
AD8
A
871 895Right-handed alpha
Helix 36
AD9
A
901 913Right-handed alpha
Helix 37
AE1
A
1011 1015Right-handed 310
Helix 38
AE2
A
1017 1033Right-handed alpha
Helix 39
AE3
A
1052 1056Right-handed 310
Helix 40
AE4
A
1060 1065Right-handed alpha
Helix 41
AE5
A
1069 1077Right-handed alpha
Helix 42
AE6
A
1079 1086Right-handed alpha
Helix 43
AE7
A
1093 1103Right-handed alpha
Helix 44
AE8
A
1103 1119Right-handed alpha
Helix 45
AE9
A
1122 1136Right-handed alpha
Helix 46
AF1
A
1136 1142Right-handed alpha
Helix 47
AF2
A
1148 1170Right-handed alpha
Helix 48
AF3
A
1171 1209Right-handed alpha
Helix 49
AF4
A
1233 1238Right-handed alpha
Helix 50
AF5
A
1245 1259Right-handed alpha
Helix 51
AF6
A
1276 1283Right-handed alpha
Helix 52
AF7
A
1295 1307Right-handed alpha
Helix 53
AF8
A
1310 1314Right-handed 310
Helix 54
AF9
A
1315 1323Right-handed alpha
Helix 55
AG1
A
1332 1338Right-handed alpha
Helix 56
AG2
A
1346 1350Right-handed 310
Helix 57
AG3
A
1368 1381Right-handed alpha
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There are 5 sheets in PDB entry 5WTK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
22 25anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
36 40anti-parallel
Strand 3
A
48 49anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
533 535first strand
Strand 2
A
555 557anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1214 1217first strand
Strand 2
A
1241 1243anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1357 1358first strand
Strand 2
A
1363 1364anti-parallel
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