Analysis of interatomic Contacts of Structural Units in PDB entry:
5WTL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WTL entry

There are 4 chains in PDB entry 5WTL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 198LYS 455
B
 ASP 198LYS 455
C
 SER 196LYS 455
D
 ASP 209LYS 455
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5WTL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
232 236Right-handed 310
Helix 2
AA2
A
244 248Right-handed 310
Helix 3
AA3
A
259 263Right-handed 310
Helix 4
AA4
A
271 275Right-handed 310
Helix 5
AA5
A
286 290Right-handed 310
Helix 6
AA6
A
298 302Right-handed 310
Helix 7
AA7
A
327 331Right-handed 310
Helix 8
AA8
A
337 350Right-handed alpha
Helix 9
AA9
A
361 363Right-handed 310
Helix 10
AB1
A
364 377Right-handed alpha
Helix 11
AB2
A
394 416Right-handed alpha
Helix 12
AB3
A
419 421Right-handed 310
Helix 13
AB4
A
439 447Right-handed alpha
Helix 14
AB5
B
205 209Right-handed 310
Helix 15
AB6
B
244 248Right-handed 310
Helix 16
AB7
B
259 263Right-handed 310
Helix 17
AB8
B
271 275Right-handed 310
Helix 18
AB9
B
286 290Right-handed 310
Helix 19
AC1
B
298 302Right-handed 310
Helix 20
AC2
B
337 349Right-handed alpha
Helix 21
AC3
B
361 363Right-handed 310
Helix 22
AC4
B
364 378Right-handed alpha
Helix 23
AC5
B
394 416Right-handed alpha
Helix 24
AC6
B
419 421Right-handed 310
Helix 25
AC7
B
439 447Right-handed alpha
Helix 26
AC8
C
205 209Right-handed 310
Helix 27
AC9
C
232 236Right-handed 310
Helix 28
AD1
C
244 248Right-handed 310
Helix 29
AD2
C
259 263Right-handed 310
Helix 30
AD3
C
271 275Right-handed 310
Helix 31
AD4
C
315 319Right-handed 310
Helix 32
AD5
C
327 331Right-handed 310
Helix 33
AD6
C
337 350Right-handed alpha
Helix 34
AD7
C
361 363Right-handed 310
Helix 35
AD8
C
364 378Right-handed alpha
Helix 36
AD9
C
394 416Right-handed alpha
Helix 37
AE1
C
419 421Right-handed 310
Helix 38
AE2
C
439 447Right-handed alpha
Helix 39
AE3
D
232 236Right-handed 310
Helix 40
AE4
D
244 248Right-handed 310
Helix 41
AE5
D
259 263Right-handed 310
Helix 42
AE6
D
271 275Right-handed 310
Helix 43
AE7
D
298 302Right-handed 310
Helix 44
AE8
D
327 331Right-handed 310
Helix 45
AE9
D
337 349Right-handed alpha
Helix 46
AF1
D
361 363Right-handed 310
Helix 47
AF2
D
364 377Right-handed alpha
Helix 48
AF3
D
394 416Right-handed alpha
Helix 49
AF4
D
419 421Right-handed 310
Helix 50
AF5
D
439 447Right-handed alpha
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There are 4 sheets in PDB entry 5WTL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 429first strand
Strand 2
A
383 388parallel
Strand 3
A
448 453anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
423 429first strand
Strand 2
B
383 388parallel
Strand 3
B
448 453anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
423 429first strand
Strand 2
C
383 388parallel
Strand 3
C
448 453anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
423 429first strand
Strand 2
D
383 388parallel
Strand 3
D
448 453anti-parallel
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