Analysis of interatomic Contacts of Structural Units in PDB entry:
5WTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WTZ entry

There is 1 chain in PDB entry 5WTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ILE 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 5WTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
0 6Right-handed alpha
Helix 2
AA2
A
13 30Right-handed alpha
Helix 3
AA3
A
33 60Right-handed alpha
Helix 4
AA4
A
67 82Right-handed alpha
Helix 5
AA5
A
97 102Right-handed 310
Helix 6
AA6
A
117 129Right-handed alpha
Helix 7
AA7
A
217 236Right-handed alpha
Helix 8
AA8
A
237 249Right-handed alpha
Helix 9
AA9
A
251 262Right-handed alpha
Helix 10
AB1
A
269 285Right-handed alpha
Helix 11
AB2
A
300 305Right-handed 310
Helix 12
AB3
A
310 314Right-handed 310
Helix 13
AB4
A
317 329Right-handed alpha
Helix 14
AB5
A
348 352Right-handed 310
Helix 15
AB6
A
372 374Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 5WTZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 96first strand
Strand 2
A
154 160anti-parallel
Strand 3
A
199 209parallel
Strand 4
A
185 196anti-parallel
Strand 5
A
132 134anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 142first strand
Strand 2
A
177 180anti-parallel
Strand 3
A
166 169anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 299first strand
Strand 2
A
356 362anti-parallel
Strand 3
A
409 419parallel
Strand 4
A
389 401anti-parallel
Strand 5
A
332 335anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 342first strand
Strand 2
A
382 385anti-parallel
Strand 3
A
368 370anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il