Analysis of interatomic Contacts of Structural Units in PDB entry:
5WU6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WU6 entry

There are 4 chains in PDB entry 5WU6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 55	PRO 597
B	LEU 55	PRO 597
C	LEU 55	PRO 597
D	ASP 145	VAL 200

There are 55 helices in PDB entry 5WU6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	68	77	Right-handed alpha
Helix 2	AA2	A	78	80	Right-handed 310
Helix 3	AA3	A	101	111	Right-handed alpha
Helix 4	AA4	A	146	155	Right-handed alpha
Helix 5	AA5	A	158	171	Right-handed alpha
Helix 6	AA6	A	173	195	Right-handed alpha
Helix 7	AA7	A	335	351	Right-handed alpha
Helix 8	AA8	A	387	403	Right-handed alpha
Helix 9	AA9	A	405	420	Right-handed alpha
Helix 10	AB1	A	430	444	Right-handed alpha
Helix 11	AB2	A	452	459	Right-handed alpha
Helix 12	AB3	A	490	505	Right-handed alpha
Helix 13	AB4	A	556	574	Right-handed alpha
Helix 14	AB5	A	576	581	Right-handed alpha
Helix 15	AB6	A	591	596	Right-handed alpha
Helix 16	AB7	B	68	77	Right-handed alpha
Helix 17	AB8	B	101	109	Right-handed alpha
Helix 18	AB9	B	146	156	Right-handed alpha
Helix 19	AC1	B	158	171	Right-handed alpha
Helix 20	AC2	B	173	195	Right-handed alpha
Helix 21	AC3	B	336	351	Right-handed alpha
Helix 22	AC4	B	387	403	Right-handed alpha
Helix 23	AC5	B	405	421	Right-handed alpha
Helix 24	AC6	B	430	444	Right-handed alpha
Helix 25	AC7	B	452	460	Right-handed alpha
Helix 26	AC8	B	478	482	Right-handed 310
Helix 27	AC9	B	490	505	Right-handed alpha
Helix 28	AD1	B	556	575	Right-handed alpha
Helix 29	AD2	B	576	581	Right-handed alpha
Helix 30	AD3	B	591	596	Right-handed alpha
Helix 31	AD4	C	68	77	Right-handed alpha
Helix 32	AD5	C	101	111	Right-handed alpha
Helix 33	AD6	C	147	154	Right-handed alpha
Helix 34	AD7	C	158	171	Right-handed alpha
Helix 35	AD8	C	173	195	Right-handed alpha
Helix 36	AD9	C	330	351	Right-handed alpha
Helix 37	AE1	C	387	403	Right-handed alpha
Helix 38	AE2	C	405	420	Right-handed alpha
Helix 39	AE3	C	430	444	Right-handed alpha
Helix 40	AE4	C	452	460	Right-handed alpha
Helix 41	AE5	C	490	505	Right-handed alpha
Helix 42	AE6	C	556	575	Right-handed alpha
Helix 43	AE7	C	576	581	Right-handed alpha
Helix 44	AE8	C	591	596	Right-handed alpha
Helix 45	AE9	D	146	155	Right-handed alpha
Helix 46	AF1	D	158	171	Right-handed alpha
Helix 47	AF2	D	173	193	Right-handed alpha
Helix 48	AF3	D	337	351	Right-handed alpha
Helix 49	AF4	D	387	403	Right-handed alpha
Helix 50	AF5	D	405	420	Right-handed alpha
Helix 51	AF6	D	430	444	Right-handed alpha
Helix 52	AF7	D	452	459	Right-handed alpha
Helix 53	AF8	D	490	504	Right-handed alpha
Helix 54	AF9	D	556	575	Right-handed alpha
Helix 55	AG1	D	576	581	Right-handed alpha

There are 16 sheets in PDB entry 5WU6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	87	first strand
Strand 2	A	95	99	anti-parallel
Strand 3	A	57	61	anti-parallel
Strand 4	A	122	125	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	115	116	first strand
Strand 2	A	119	120	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	203	first strand
Strand 2	A	218	222	anti-parallel
Strand 3	A	378	383	parallel
Strand 4	A	368	373	anti-parallel
Strand 5	A	355	361	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	467	468	first strand
Strand 2	A	471	472	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	518	521	first strand
Strand 2	A	510	513	anti-parallel
Strand 3	A	541	542	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	86	first strand
Strand 2	B	95	99	anti-parallel
Strand 3	B	57	61	anti-parallel
Strand 4	B	119	124	anti-parallel
Strand 5	B	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	203	first strand
Strand 2	B	218	222	anti-parallel
Strand 3	B	379	383	parallel
Strand 4	B	368	373	anti-parallel
Strand 5	B	355	361	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	468	first strand
Strand 2	B	471	472	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	521	first strand
Strand 2	B	510	513	anti-parallel
Strand 3	B	541	542	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	87	first strand
Strand 2	C	95	99	anti-parallel
Strand 3	C	57	61	anti-parallel
Strand 4	C	119	124	anti-parallel
Strand 5	C	114	116	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	203	first strand
Strand 2	C	218	222	anti-parallel
Strand 3	C	378	383	parallel
Strand 4	C	368	373	anti-parallel
Strand 5	C	355	361	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	467	468	first strand
Strand 2	C	471	472	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	518	521	first strand
Strand 2	C	510	513	anti-parallel
Strand 3	C	541	542	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	199	203	first strand
Strand 2	D	218	222	anti-parallel
Strand 3	D	378	383	parallel
Strand 4	D	368	373	anti-parallel
Strand 5	D	355	361	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	467	468	first strand
Strand 2	D	471	472	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	518	521	first strand
Strand 2	D	510	513	anti-parallel
Strand 3	D	540	542	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WU6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WU6