Analysis of interatomic Contacts of Structural Units in PDB entry:
5WU7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WU7 entry

There are 2 chains in PDB entry 5WU7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 550
B
 MET 1LEU 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5WU7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 36Right-handed alpha
Helix 2
AA2
A
36 50Right-handed alpha
Helix 3
AA3
A
61 69Right-handed alpha
Helix 4
AA4
A
70 95Right-handed alpha
Helix 5
AA5
A
97 121Right-handed alpha
Helix 6
AA6
A
124 135Right-handed alpha
Helix 7
AA7
A
149 153Right-handed 310
Helix 8
AA8
A
155 175Right-handed alpha
Helix 9
AA9
A
183 187Right-handed 310
Helix 10
AB1
A
207 215Right-handed alpha
Helix 11
AB2
A
224 229Right-handed alpha
Helix 12
AB3
A
264 270Right-handed alpha
Helix 13
AB4
A
277 281Right-handed 310
Helix 14
AB5
A
314 345Right-handed alpha
Helix 15
AB6
A
357 359Right-handed 310
Helix 16
AB7
A
365 379Right-handed alpha
Helix 17
AB8
A
386 393Right-handed alpha
Helix 18
AB9
A
409 418Right-handed 310
Helix 19
AC1
A
424 444Right-handed alpha
Helix 20
AC2
A
447 465Right-handed alpha
Helix 21
AC3
A
467 475Right-handed alpha
Helix 22
AC4
A
478 507Right-handed alpha
Helix 23
AC5
A
511 522Right-handed alpha
Helix 24
AC6
A
530 534Right-handed 310
Helix 25
AC7
B
25 36Right-handed alpha
Helix 26
AC8
B
36 50Right-handed alpha
Helix 27
AC9
B
61 69Right-handed alpha
Helix 28
AD1
B
70 95Right-handed alpha
Helix 29
AD2
B
97 121Right-handed alpha
Helix 30
AD3
B
124 136Right-handed alpha
Helix 31
AD4
B
149 153Right-handed 310
Helix 32
AD5
B
155 175Right-handed alpha
Helix 33
AD6
B
183 187Right-handed 310
Helix 34
AD7
B
207 215Right-handed alpha
Helix 35
AD8
B
223 229Right-handed alpha
Helix 36
AD9
B
265 273Right-handed alpha
Helix 37
AE1
B
277 281Right-handed 310
Helix 38
AE2
B
306 310Right-handed 310
Helix 39
AE3
B
314 345Right-handed alpha
Helix 40
AE4
B
357 359Right-handed 310
Helix 41
AE5
B
365 379Right-handed alpha
Helix 42
AE6
B
386 392Right-handed alpha
Helix 43
AE7
B
409 413Right-handed 310
Helix 44
AE8
B
414 418Right-handed 310
Helix 45
AE9
B
424 444Right-handed alpha
Helix 46
AF1
B
447 465Right-handed alpha
Helix 47
AF2
B
467 476Right-handed alpha
Helix 48
AF3
B
478 506Right-handed alpha
Helix 49
AF4
B
511 522Right-handed alpha
Helix 50
AF5
B
530 534Right-handed 310
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There are 8 sheets in PDB entry 5WU7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
138 143parallel
Strand 3
A
56 60parallel
Strand 4
A
3 11parallel
Strand 5
A
349 355parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 182first strand
Strand 2
A
138 143parallel
Strand 3
A
56 60parallel
Strand 4
A
3 11parallel
Strand 5
A
382 384parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 195first strand
Strand 2
A
202 205anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
259 262parallel
Strand 3
A
252 253anti-parallel
Strand 4
A
399 400parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
138 143parallel
Strand 3
B
56 60parallel
Strand 4
B
3 11parallel
Strand 5
B
348 355parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
138 143parallel
Strand 3
B
56 60parallel
Strand 4
B
3 11parallel
Strand 5
B
382 384parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 195first strand
Strand 2
B
202 205anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 222first strand
Strand 2
B
259 262parallel
Strand 3
B
252 253anti-parallel
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