Analysis of interatomic Contacts of Structural Units in PDB entry:
5WVA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WVA entry

There are 2 chains in PDB entry 5WVA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 5ALA 249
B
 HIS 5ALA 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5WVA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 32Right-handed alpha
Helix 2
AA2
A
43 57Right-handed alpha
Helix 3
AA3
A
70 86Right-handed alpha
Helix 4
AA4
A
107 119Right-handed alpha
Helix 5
AA5
A
119 132Right-handed alpha
Helix 6
AA6
A
144 148Right-handed 310
Helix 7
AA7
A
155 177Right-handed alpha
Helix 8
AA8
A
178 180Right-handed 310
Helix 9
AA9
A
199 208Right-handed alpha
Helix 10
AB1
A
217 230Right-handed alpha
Helix 11
AB2
B
19 32Right-handed alpha
Helix 12
AB3
B
70 86Right-handed alpha
Helix 13
AB4
B
107 119Right-handed alpha
Helix 14
AB5
B
119 131Right-handed alpha
Helix 15
AB6
B
144 148Right-handed 310
Helix 16
AB7
B
155 177Right-handed alpha
Helix 17
AB8
B
178 180Right-handed 310
Helix 18
AB9
B
217 230Right-handed alpha
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There are 2 sheets in PDB entry 5WVA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 65first strand
Strand 2
A
35 40parallel
Strand 3
A
11 15parallel
Strand 4
A
88 93parallel
Strand 5
A
133 142parallel
Strand 6
A
182 188parallel
Strand 7
A
240 243parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 54first strand
Strand 2
B
61 65anti-parallel
Strand 3
B
35 40parallel
Strand 4
B
11 15parallel
Strand 5
B
88 93parallel
Strand 6
B
133 142parallel
Strand 7
B
182 188parallel
Strand 8
B
240 243parallel
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