Analysis of interatomic Contacts of Structural Units in PDB entry:
5WVB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WVB entry

There is 1 chain in PDB entry 5WVB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 91SER 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5WVB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 106Right-handed 310
Helix 2
AA2
A
107 111Right-handed 310
Helix 3
AA3
A
113 117Right-handed 310
Helix 4
AA4
A
141 145Right-handed 310
Helix 5
AA5
A
152 159Right-handed alpha
Helix 6
AA6
A
159 164Right-handed alpha
Helix 7
AA7
A
180 188Right-handed alpha
Helix 8
AA8
A
189 206Right-handed alpha
Helix 9
AA9
A
220 247Right-handed alpha
Helix 10
AB1
A
260 268Right-handed alpha
Helix 11
AB2
A
269 277Right-handed alpha
Helix 12
AB3
A
310 314Right-handed 310
Helix 13
AB4
A
315 327Right-handed alpha
Helix 14
AB5
A
329 331Right-handed 310
Helix 15
AB6
A
376 384Right-handed alpha
Helix 16
AB7
A
411 426Right-handed alpha
Helix 17
AB8
A
434 438Right-handed 310
Helix 18
AB9
A
451 463Right-handed alpha
Helix 19
AC1
A
474 479Right-handed alpha
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There are 3 sheets in PDB entry 5WVB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 138first strand
Strand 2
A
124 133anti-parallel
Strand 3
A
168 174parallel
Strand 4
A
211 215parallel
Strand 5
A
252 257parallel
Strand 6
A
279 282parallel
Strand 7
A
333 338parallel
Strand 8
A
429 433parallel
Strand 9
A
94 100parallel
Strand 10
A
124 133parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
340 346anti-parallel
Strand 3
A
373 375anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 360first strand
Strand 2
A
340 346anti-parallel
Strand 3
A
405 408anti-parallel
Strand 4
A
397 402anti-parallel
Strand 5
A
388 392anti-parallel
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