Analysis of interatomic Contacts of Structural Units in PDB entry:
5WVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WVG entry

There is 1 chain in PDB entry 5WVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 528LEU 897
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5WVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
538 542Right-handed 310
Helix 2
AA2
A
543 547Right-handed 310
Helix 3
AA3
A
549 553Right-handed 310
Helix 4
AA4
A
577 579Right-handed 310
Helix 5
AA5
A
580 588Right-handed alpha
Helix 6
AA6
A
590 594Right-handed 310
Helix 7
AA7
A
610 617Right-handed alpha
Helix 8
AA8
A
619 638Right-handed alpha
Helix 9
AA9
A
651 677Right-handed alpha
Helix 10
AB1
A
690 698Right-handed alpha
Helix 11
AB2
A
699 707Right-handed alpha
Helix 12
AB3
A
740 744Right-handed 310
Helix 13
AB4
A
745 756Right-handed alpha
Helix 14
AB5
A
759 761Right-handed 310
Helix 15
AB6
A
806 815Right-handed alpha
Helix 16
AB7
A
842 857Right-handed alpha
Helix 17
AB8
A
880 891Right-handed alpha
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There are 3 sheets in PDB entry 5WVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 574first strand
Strand 2
A
560 568anti-parallel
Strand 3
A
598 604parallel
Strand 4
A
641 645parallel
Strand 5
A
682 688parallel
Strand 6
A
709 713parallel
Strand 7
A
763 768parallel
Strand 8
A
860 864parallel
Strand 9
A
530 536parallel
Strand 10
A
560 568parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 791first strand
Strand 2
A
770 776anti-parallel
Strand 3
A
803 805anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 791first strand
Strand 2
A
770 776anti-parallel
Strand 3
A
836 839anti-parallel
Strand 4
A
828 833anti-parallel
Strand 5
A
819 823anti-parallel
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