Analysis of interatomic Contacts of Structural Units in PDB entry:
5WVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WVU entry

There are 3 chains in PDB entry 5WVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 510
B
 MET 1GLY 510
C
 MET 1GLY 510
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 5WVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 33Right-handed alpha
Helix 2
AA2
A
39 60Right-handed alpha
Helix 3
AA3
A
60 71Right-handed alpha
Helix 4
AA4
A
73 77Right-handed 310
Helix 5
AA5
A
81 100Right-handed alpha
Helix 6
AA6
A
101 123Right-handed alpha
Helix 7
AA7
A
127 151Right-handed alpha
Helix 8
AA8
A
163 173Right-handed alpha
Helix 9
AA9
A
177 201Right-handed alpha
Helix 10
AB1
A
207 213Right-handed 310
Helix 11
AB2
A
216 232Right-handed alpha
Helix 12
AB3
A
234 236Right-handed 310
Helix 13
AB4
A
266 287Right-handed alpha
Helix 14
AB5
A
288 292Right-handed 310
Helix 15
AB6
A
294 298Right-handed 310
Helix 16
AB7
A
301 314Right-handed alpha
Helix 17
AB8
A
319 334Right-handed alpha
Helix 18
AB9
A
335 338Right-handed 310
Helix 19
AC1
A
341 349Right-handed alpha
Helix 20
AC2
A
357 361Right-handed 310
Helix 21
AC3
A
365 382Right-handed alpha
Helix 22
AC4
A
386 388Right-handed 310
Helix 23
AC5
A
389 403Right-handed alpha
Helix 24
AC6
A
427 449Right-handed alpha
Helix 25
AC7
A
451 457Right-handed alpha
Helix 26
AC8
A
460 471Right-handed alpha
Helix 27
AC9
A
472 475Right-handed 310
Helix 28
AD1
A
479 489Right-handed alpha
Helix 29
AD2
A
494 509Right-handed alpha
Helix 30
AD3
B
2 31Right-handed alpha
Helix 31
AD4
B
36 38Right-handed 310
Helix 32
AD5
B
39 59Right-handed alpha
Helix 33
AD6
B
60 71Right-handed alpha
Helix 34
AD7
B
73 77Right-handed 310
Helix 35
AD8
B
81 100Right-handed alpha
Helix 36
AD9
B
101 126Right-handed alpha
Helix 37
AE1
B
131 151Right-handed alpha
Helix 38
AE2
B
163 173Right-handed alpha
Helix 39
AE3
B
177 201Right-handed alpha
Helix 40
AE4
B
209 213Right-handed 310
Helix 41
AE5
B
218 232Right-handed alpha
Helix 42
AE6
B
234 236Right-handed 310
Helix 43
AE7
B
266 287Right-handed alpha
Helix 44
AE8
B
288 292Right-handed 310
Helix 45
AE9
B
294 298Right-handed 310
Helix 46
AF1
B
301 314Right-handed alpha
Helix 47
AF2
B
319 334Right-handed alpha
Helix 48
AF3
B
335 338Right-handed 310
Helix 49
AF4
B
341 350Right-handed alpha
Helix 50
AF5
B
365 382Right-handed alpha
Helix 51
AF6
B
386 388Right-handed 310
Helix 52
AF7
B
389 403Right-handed alpha
Helix 53
AF8
B
427 449Right-handed alpha
Helix 54
AF9
B
451 457Right-handed alpha
Helix 55
AG1
B
460 471Right-handed alpha
Helix 56
AG2
B
472 475Right-handed 310
Helix 57
AG3
B
479 489Right-handed alpha
Helix 58
AG4
B
494 509Right-handed alpha
Helix 59
AG5
C
2 33Right-handed alpha
Helix 60
AG6
C
36 38Right-handed 310
Helix 61
AG7
C
39 59Right-handed alpha
Helix 62
AG8
C
60 71Right-handed alpha
Helix 63
AG9
C
73 77Right-handed 310
Helix 64
AH1
C
81 100Right-handed alpha
Helix 65
AH2
C
101 126Right-handed alpha
Helix 66
AH3
C
127 151Right-handed alpha
Helix 67
AH4
C
163 173Right-handed alpha
Helix 68
AH5
C
177 201Right-handed alpha
Helix 69
AH6
C
207 213Right-handed 310
Helix 70
AH7
C
216 232Right-handed alpha
Helix 71
AH8
C
234 238Right-handed 310
Helix 72
AH9
C
267 286Right-handed alpha
Helix 73
AI1
C
287 292Right-handed 310
Helix 74
AI2
C
294 298Right-handed 310
Helix 75
AI3
C
301 314Right-handed alpha
Helix 76
AI4
C
319 334Right-handed alpha
Helix 77
AI5
C
335 338Right-handed 310
Helix 78
AI6
C
341 349Right-handed alpha
Helix 79
AI7
C
365 382Right-handed alpha
Helix 80
AI8
C
386 388Right-handed 310
Helix 81
AI9
C
389 403Right-handed alpha
Helix 82
AJ1
C
412 416Right-handed 310
Helix 83
AJ2
C
417 422Right-handed 310
Helix 84
AJ3
C
427 449Right-handed alpha
Helix 85
AJ4
C
451 457Right-handed alpha
Helix 86
AJ5
C
460 471Right-handed alpha
Helix 87
AJ6
C
472 475Right-handed 310
Helix 88
AJ7
C
479 489Right-handed alpha
Helix 89
AJ8
C
494 510Right-handed alpha
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There are 3 sheets in PDB entry 5WVU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 242first strand
Strand 2
A
255 260parallel
Strand 3
A
248 252anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
238 242first strand
Strand 2
B
255 260parallel
Strand 3
B
247 252anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
240 242first strand
Strand 2
C
255 260parallel
Strand 3
C
248 252anti-parallel
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