Analysis of interatomic Contacts of Structural Units in PDB entry:
5WWN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WWN entry

There is 1 chain in PDB entry 5WWN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 82ASN 786
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5WWN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 107Right-handed alpha
Helix 2
AA2
A
110 115Right-handed alpha
Helix 3
AA3
A
144 154Right-handed alpha
Helix 4
AA4
A
172 183Right-handed alpha
Helix 5
AA5
A
194 198Right-handed 310
Helix 6
AA6
A
201 218Right-handed alpha
Helix 7
AA7
A
231 245Right-handed alpha
Helix 8
AA8
A
250 255Right-handed alpha
Helix 9
AA9
A
466 482Right-handed alpha
Helix 10
AB1
A
493 498Right-handed alpha
Helix 11
AB2
A
506 510Right-handed 310
Helix 12
AB3
A
533 548Right-handed alpha
Helix 13
AB4
A
566 568Right-handed 310
Helix 14
AB5
A
723 730Right-handed alpha
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There are 4 sheets in PDB entry 5WWN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
134 138anti-parallel
Strand 3
A
84 90parallel
Strand 4
A
157 162parallel
Strand 5
A
187 192parallel
Strand 6
A
226 228parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
263 268first strand
Strand 2
A
273 284anti-parallel
Strand 3
A
556 564anti-parallel
Strand 4
A
299 307anti-parallel
Strand 5
A
292 295anti-parallel
Strand 6
A
580 583anti-parallel
Strand 7
A
257 260anti-parallel
Strand 8
A
273 284anti-parallel
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There are 12 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 503first strand
Strand 2
A
769 777anti-parallel
Strand 3
A
696 711anti-parallel
Strand 4
A
639 643parallel
Strand 5
A
628 630anti-parallel
Strand 6
A
652 659anti-parallel
Strand 7
A
591 600anti-parallel
Strand 8
A
680 691anti-parallel
Strand 9
A
666 672anti-parallel
Strand 10
A
614 618anti-parallel
Strand 11
A
621 625anti-parallel
Strand 12
A
783 784anti-parallel
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There are 16 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
502 503first strand
Strand 2
A
769 777anti-parallel
Strand 3
A
735 737anti-parallel
Strand 4
A
742 749anti-parallel
Strand 5
A
754 759anti-parallel
Strand 6
A
714 718anti-parallel
Strand 7
A
696 711anti-parallel
Strand 8
A
639 643parallel
Strand 9
A
628 630anti-parallel
Strand 10
A
652 659anti-parallel
Strand 11
A
591 600anti-parallel
Strand 12
A
680 691anti-parallel
Strand 13
A
666 672anti-parallel
Strand 14
A
614 618anti-parallel
Strand 15
A
621 625anti-parallel
Strand 16
A
783 784anti-parallel
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