Analysis of interatomic Contacts of Structural Units in PDB entry:
5WX4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WX4 entry

There are 3 chains in PDB entry 5WX4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4LEU 395
B
 PHE 5LEU 395
C
 PHE 5LEU 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 5WX4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 17Right-handed alpha
Helix 2
AA2
A
41 50Right-handed alpha
Helix 3
AA3
A
55 68Right-handed alpha
Helix 4
AA4
A
79 86Right-handed alpha
Helix 5
AA5
A
87 91Right-handed 310
Helix 6
AA6
A
96 124Right-handed alpha
Helix 7
AA7
A
126 130Right-handed 310
Helix 8
AA8
A
145 155Right-handed alpha
Helix 9
AA9
A
171 187Right-handed alpha
Helix 10
AB1
A
200 204Right-handed 310
Helix 11
AB2
A
210 220Right-handed alpha
Helix 12
AB3
A
276 294Right-handed alpha
Helix 13
AB4
A
295 297Right-handed 310
Helix 14
AB5
A
300 304Right-handed 310
Helix 15
AB6
A
312 323Right-handed alpha
Helix 16
AB7
A
330 341Right-handed alpha
Helix 17
AB8
A
343 345Right-handed 310
Helix 18
AB9
A
346 362Right-handed alpha
Helix 19
AC1
B
6 17Right-handed alpha
Helix 20
AC2
B
41 50Right-handed alpha
Helix 21
AC3
B
55 68Right-handed alpha
Helix 22
AC4
B
79 86Right-handed alpha
Helix 23
AC5
B
87 91Right-handed 310
Helix 24
AC6
B
96 124Right-handed alpha
Helix 25
AC7
B
126 130Right-handed 310
Helix 26
AC8
B
145 155Right-handed alpha
Helix 27
AC9
B
171 187Right-handed alpha
Helix 28
AD1
B
200 204Right-handed 310
Helix 29
AD2
B
210 220Right-handed alpha
Helix 30
AD3
B
276 294Right-handed alpha
Helix 31
AD4
B
295 297Right-handed 310
Helix 32
AD5
B
300 304Right-handed 310
Helix 33
AD6
B
312 324Right-handed alpha
Helix 34
AD7
B
330 341Right-handed alpha
Helix 35
AD8
B
343 345Right-handed 310
Helix 36
AD9
B
346 362Right-handed alpha
Helix 37
AE1
C
6 18Right-handed alpha
Helix 38
AE2
C
41 50Right-handed alpha
Helix 39
AE3
C
55 69Right-handed alpha
Helix 40
AE4
C
79 86Right-handed alpha
Helix 41
AE5
C
87 91Right-handed 310
Helix 42
AE6
C
96 124Right-handed alpha
Helix 43
AE7
C
126 130Right-handed 310
Helix 44
AE8
C
145 155Right-handed alpha
Helix 45
AE9
C
171 187Right-handed alpha
Helix 46
AF1
C
200 204Right-handed 310
Helix 47
AF2
C
210 220Right-handed alpha
Helix 48
AF3
C
276 294Right-handed alpha
Helix 49
AF4
C
295 297Right-handed 310
Helix 50
AF5
C
300 304Right-handed 310
Helix 51
AF6
C
312 323Right-handed alpha
Helix 52
AF7
C
330 341Right-handed alpha
Helix 53
AF8
C
343 345Right-handed 310
Helix 54
AF9
C
346 363Right-handed alpha
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There are 9 sheets in PDB entry 5WX4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 166first strand
Strand 2
A
132 137parallel
Strand 3
A
191 198parallel
Strand 4
A
223 231anti-parallel
Strand 5
A
23 31anti-parallel
Strand 6
A
243 252anti-parallel
Strand 7
A
384 391anti-parallel
Strand 8
A
373 380anti-parallel
Strand 9
A
305 308parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
73 75anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 265first strand
Strand 2
A
268 273anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 166first strand
Strand 2
B
132 137parallel
Strand 3
B
192 198parallel
Strand 4
B
223 231anti-parallel
Strand 5
B
23 31anti-parallel
Strand 6
B
243 252anti-parallel
Strand 7
B
384 392anti-parallel
Strand 8
B
373 380anti-parallel
Strand 9
B
305 308parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
73 75anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
C
260 265anti-parallel
Strand 3
C
268 273anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 273first strand
Strand 2
B
260 265anti-parallel
Strand 3
C
142 143anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 166first strand
Strand 2
C
132 137parallel
Strand 3
C
191 198parallel
Strand 4
C
223 231anti-parallel
Strand 5
C
23 31anti-parallel
Strand 6
C
243 252anti-parallel
Strand 7
C
384 392anti-parallel
Strand 8
C
373 380anti-parallel
Strand 9
C
305 308parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 38first strand
Strand 2
C
73 75anti-parallel
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