Analysis of interatomic Contacts of Structural Units in PDB entry:
5WX6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WX6 entry

There are 4 chains in PDB entry 5WX6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 9	ASN 384
B	GLN 9	ASN 384
C	GLN 9	ILE 383
D	SER 3	HIS 177

There are 67 helices in PDB entry 5WX6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	37	Right-handed alpha
Helix 2	AA2	A	42	55	Right-handed alpha
Helix 3	AA3	A	66	73	Right-handed alpha
Helix 4	AA4	A	74	78	Right-handed 310
Helix 5	AA5	A	83	111	Right-handed alpha
Helix 6	AA6	A	113	117	Right-handed 310
Helix 7	AA7	A	132	142	Right-handed alpha
Helix 8	AA8	A	155	157	Right-handed 310
Helix 9	AA9	A	158	175	Right-handed alpha
Helix 10	AB1	A	187	191	Right-handed 310
Helix 11	AB2	A	200	209	Right-handed alpha
Helix 12	AB3	A	244	246	Right-handed 310
Helix 13	AB4	A	264	281	Right-handed alpha
Helix 14	AB5	A	288	292	Right-handed 310
Helix 15	AB6	A	300	312	Right-handed alpha
Helix 16	AB7	A	318	329	Right-handed alpha
Helix 17	AB8	A	334	350	Right-handed alpha
Helix 18	AB9	B	28	37	Right-handed alpha
Helix 19	AC1	B	42	55	Right-handed alpha
Helix 20	AC2	B	66	73	Right-handed alpha
Helix 21	AC3	B	74	78	Right-handed 310
Helix 22	AC4	B	83	111	Right-handed alpha
Helix 23	AC5	B	113	117	Right-handed 310
Helix 24	AC6	B	132	142	Right-handed alpha
Helix 25	AC7	B	155	157	Right-handed 310
Helix 26	AC8	B	158	175	Right-handed alpha
Helix 27	AC9	B	187	191	Right-handed 310
Helix 28	AD1	B	199	209	Right-handed alpha
Helix 29	AD2	B	264	282	Right-handed alpha
Helix 30	AD3	B	288	292	Right-handed 310
Helix 31	AD4	B	300	312	Right-handed alpha
Helix 32	AD5	B	318	329	Right-handed alpha
Helix 33	AD6	B	334	350	Right-handed alpha
Helix 34	AD7	C	28	37	Right-handed alpha
Helix 35	AD8	C	42	55	Right-handed alpha
Helix 36	AD9	C	66	73	Right-handed alpha
Helix 37	AE1	C	74	78	Right-handed 310
Helix 38	AE2	C	83	111	Right-handed alpha
Helix 39	AE3	C	113	117	Right-handed 310
Helix 40	AE4	C	132	142	Right-handed alpha
Helix 41	AE5	C	155	157	Right-handed 310
Helix 42	AE6	C	158	175	Right-handed alpha
Helix 43	AE7	C	187	191	Right-handed 310
Helix 44	AE8	C	199	209	Right-handed alpha
Helix 45	AE9	C	264	281	Right-handed alpha
Helix 46	AF1	C	300	312	Right-handed alpha
Helix 47	AF2	C	314	317	Right-handed 310
Helix 48	AF3	C	318	329	Right-handed alpha
Helix 49	AF4	C	334	350	Right-handed alpha
Helix 50	AF5	D	4	8	Right-handed alpha
Helix 51	AF6	D	28	37	Right-handed alpha
Helix 52	AF7	D	42	55	Right-handed alpha
Helix 53	AF8	D	66	73	Right-handed alpha
Helix 54	AF9	D	74	78	Right-handed 310
Helix 55	AG1	D	83	111	Right-handed alpha
Helix 56	AG2	D	113	117	Right-handed 310
Helix 57	AG3	D	132	142	Right-handed alpha
Helix 58	AG4	D	155	157	Right-handed 310
Helix 59	AG5	D	158	175	Right-handed alpha
Helix 60	AG6	D	187	191	Right-handed 310
Helix 61	AG7	D	199	204	Right-handed alpha
Helix 62	AG8	D	204	209	Right-handed alpha
Helix 63	AG9	D	264	281	Right-handed alpha
Helix 64	AH1	D	300	312	Right-handed alpha
Helix 65	AH2	D	314	317	Right-handed 310
Helix 66	AH3	D	318	329	Right-handed alpha
Helix 67	AH4	D	334	350	Right-handed alpha

There are 12 sheets in PDB entry 5WX6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	153	first strand
Strand 2	A	119	124	parallel
Strand 3	A	179	186	parallel
Strand 4	A	212	219	anti-parallel
Strand 5	A	11	18	anti-parallel
Strand 6	A	231	240	anti-parallel
Strand 7	A	372	380	anti-parallel
Strand 8	A	361	368	anti-parallel
Strand 9	A	293	296	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	A	60	62	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	253	first strand
Strand 2	A	256	261	anti-parallel

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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	153	first strand
Strand 2	B	119	124	parallel
Strand 3	B	179	186	parallel
Strand 4	B	212	219	anti-parallel
Strand 5	B	11	18	anti-parallel
Strand 6	B	231	240	anti-parallel
Strand 7	B	372	380	anti-parallel
Strand 8	B	361	368	anti-parallel
Strand 9	B	293	296	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	25	first strand
Strand 2	B	60	62	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	253	first strand
Strand 2	B	256	261	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	153	first strand
Strand 2	C	119	124	parallel
Strand 3	C	179	186	parallel
Strand 4	C	212	219	anti-parallel
Strand 5	C	11	18	anti-parallel
Strand 6	C	231	240	anti-parallel
Strand 7	C	372	380	anti-parallel
Strand 8	C	361	368	anti-parallel
Strand 9	C	292	296	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	C	60	62	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	253	first strand
Strand 2	C	256	261	anti-parallel

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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	153	first strand
Strand 2	D	119	124	parallel
Strand 3	D	179	186	parallel
Strand 4	D	212	219	anti-parallel
Strand 5	D	11	18	anti-parallel
Strand 6	D	231	240	anti-parallel
Strand 7	D	372	379	anti-parallel
Strand 8	D	361	368	anti-parallel
Strand 9	D	293	296	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	25	first strand
Strand 2	D	60	62	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	253	first strand
Strand 2	D	256	261	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WX6

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WX6