Analysis of interatomic Contacts of Structural Units in PDB entry:
5WY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WY1 entry

There is 1 chain in PDB entry 5WY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 357ALA 1612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 5WY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
383 388Right-handed alpha
Helix 2
AA2
A
501 525Right-handed alpha
Helix 3
AA3
A
529 540Right-handed alpha
Helix 4
AA4
A
552 559Right-handed alpha
Helix 5
AA5
A
559 574Right-handed alpha
Helix 6
AA6
A
580 583Right-handed 310
Helix 7
AA7
A
584 594Right-handed alpha
Helix 8
AA8
A
624 636Right-handed alpha
Helix 9
AA9
A
694 705Right-handed alpha
Helix 10
AB1
A
804 806Right-handed 310
Helix 11
AB2
A
808 812Right-handed 310
Helix 12
AB3
A
889 893Right-handed 310
Helix 13
AB4
A
897 911Right-handed alpha
Helix 14
AB5
A
946 950Right-handed 310
Helix 15
AB6
A
973 981Right-handed 310
Helix 16
AB7
A
1032 1036Right-handed 310
Helix 17
AB8
A
1057 1059Right-handed 310
Helix 18
AB9
A
1074 1081Right-handed alpha
Helix 19
AC1
A
1103 1107Right-handed 310
Helix 20
AC2
A
1152 1162Right-handed alpha
Helix 21
AC3
A
1173 1184Right-handed alpha
Helix 22
AC4
A
1193 1202Right-handed alpha
Helix 23
AC5
A
1239 1248Right-handed alpha
Helix 24
AC6
A
1249 1262Right-handed alpha
Helix 25
AC7
A
1273 1275Right-handed 310
Helix 26
AC8
A
1276 1294Right-handed alpha
Helix 27
AC9
A
1305 1308Right-handed 310
Helix 28
AD1
A
1338 1343Right-handed 310
Helix 29
AD2
A
1369 1375Right-handed alpha
Helix 30
AD3
A
1397 1405Right-handed alpha
Helix 31
AD4
A
1421 1430Right-handed alpha
Helix 32
AD5
A
1438 1442Right-handed 310
Helix 33
AD6
A
1479 1484Right-handed 310
Helix 34
AD7
A
1500 1507Right-handed alpha
Helix 35
AD8
A
1508 1513Right-handed 310
Helix 36
AD9
A
1551 1560Right-handed alpha
Helix 37
AE1
A
1570 1581Right-handed alpha
Helix 38
AE2
A
1583 1607Right-handed alpha
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There are 13 sheets in PDB entry 5WY1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 382first strand
Strand 2
A
459 464parallel
Strand 3
A
439 446anti-parallel
Strand 4
A
410 420anti-parallel
Strand 5
A
491 494parallel
Strand 6
A
482 486anti-parallel
Strand 7
A
469 473anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 727first strand
Strand 2
A
765 770anti-parallel
Strand 3
A
778 788anti-parallel
Strand 4
A
793 802anti-parallel
Strand 5
A
816 827anti-parallel
Strand 6
A
867 874parallel
Strand 7
A
879 881anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 750first strand
Strand 2
A
778 788anti-parallel
Strand 3
A
831 835first strand
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 750first strand
Strand 2
A
778 788anti-parallel
Strand 3
A
793 802anti-parallel
Strand 4
A
816 827anti-parallel
Strand 5
A
867 874parallel
Strand 6
A
837 839parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 737first strand
Strand 2
A
753 756anti-parallel
Strand 3
A
759 761anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
913 921first strand
Strand 2
A
924 932anti-parallel
Strand 3
A
935 938anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1099 1100first strand
Strand 2
A
1085 1092anti-parallel
Strand 3
A
1061 1067parallel
Strand 4
A
942 945anti-parallel
Strand 5
A
996 1002anti-parallel
Strand 6
A
1018 1025anti-parallel
Strand 7
A
1044 1055anti-parallel
Strand 8
A
1085 1092parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1007 1008first strand
Strand 2
A
1011 1012anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1188 1190first strand
Strand 2
A
1164 1170parallel
Strand 3
A
1142 1147parallel
Strand 4
A
1222 1225parallel
Strand 5
A
1265 1271parallel
Strand 6
A
1314 1321anti-parallel
Strand 7
A
1296 1297anti-parallel
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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1188 1190first strand
Strand 2
A
1164 1170parallel
Strand 3
A
1142 1147parallel
Strand 4
A
1222 1225parallel
Strand 5
A
1265 1271parallel
Strand 6
A
1314 1321anti-parallel
Strand 7
A
1300 1303anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1346 1347first strand
Strand 2
A
1352 1353anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1388 1390first strand
Strand 2
A
1411 1413anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1447 1448first strand
Strand 2
A
1454 1455anti-parallel
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