Analysis of interatomic Contacts of Structural Units in PDB entry:
5WY2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WY2 entry

There are 4 chains in PDB entry 5WY2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 28ARG 176
B
 GLY 111THR 131
C
 ASP 28ARG 176
D
 GLY 111THR 131
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5WY2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 81Right-handed alpha
Helix 2
AA2
A
82 86Right-handed 310
Helix 3
AA3
A
99 109Right-handed alpha
Helix 4
AA4
A
122 153Right-handed alpha
Helix 5
AA5
A
155 158Right-handed 310
Helix 6
AA6
A
159 168Right-handed alpha
Helix 7
AA7
A
171 176Right-handed alpha
Helix 8
AA8
C
69 81Right-handed alpha
Helix 9
AA9
C
82 86Right-handed 310
Helix 10
AB1
C
99 112Right-handed alpha
Helix 11
AB2
C
113 115Right-handed 310
Helix 12
AB3
C
117 152Right-handed alpha
Helix 13
AB4
C
155 158Right-handed 310
Helix 14
AB5
C
159 168Right-handed alpha
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There are 4 sheets in PDB entry 5WY2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
44 53anti-parallel
Strand 3
A
62 68anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 34first strand
Strand 2
A
44 53anti-parallel
Strand 3
A
37 41anti-parallel
Strand 4
B
113 117anti-parallel
Strand 5
B
126 130anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 34first strand
Strand 2
C
44 53anti-parallel
Strand 3
C
62 68anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
31 34first strand
Strand 2
C
44 53anti-parallel
Strand 3
C
37 41anti-parallel
Strand 4
D
113 117anti-parallel
Strand 5
D
126 130anti-parallel
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