Analysis of interatomic Contacts of Structural Units in PDB entry:
5WY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5WY3 entry

There are 2 chains in PDB entry 5WY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 16SER 402
B
 SER 17SER 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 5WY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 27Right-handed alpha
Helix 2
AA2
A
40 55Right-handed alpha
Helix 3
AA3
A
57 66Right-handed alpha
Helix 4
AA4
A
79 90Right-handed alpha
Helix 5
AA5
A
94 110Right-handed alpha
Helix 6
AA6
A
111 115Right-handed 310
Helix 7
AA7
A
119 121Right-handed 310
Helix 8
AA8
A
122 131Right-handed alpha
Helix 9
AA9
A
134 151Right-handed alpha
Helix 10
AB1
A
178 189Right-handed alpha
Helix 11
AB2
A
190 192Right-handed 310
Helix 12
AB3
A
193 200Right-handed alpha
Helix 13
AB4
A
202 213Right-handed alpha
Helix 14
AB5
A
231 247Right-handed alpha
Helix 15
AB6
A
249 261Right-handed alpha
Helix 16
AB7
A
271 284Right-handed alpha
Helix 17
AB8
A
286 298Right-handed alpha
Helix 18
AB9
A
300 310Right-handed alpha
Helix 19
AC1
A
316 329Right-handed alpha
Helix 20
AC2
A
332 347Right-handed alpha
Helix 21
AC3
A
348 350Right-handed 310
Helix 22
AC4
A
351 367Right-handed alpha
Helix 23
AC5
A
368 375Right-handed alpha
Helix 24
AC6
A
376 389Right-handed alpha
Helix 25
AC7
A
392 402Right-handed alpha
Helix 26
AC8
B
18 27Right-handed alpha
Helix 27
AC9
B
40 55Right-handed alpha
Helix 28
AD1
B
57 67Right-handed alpha
Helix 29
AD2
B
80 89Right-handed alpha
Helix 30
AD3
B
94 109Right-handed alpha
Helix 31
AD4
B
119 121Right-handed 310
Helix 32
AD5
B
122 131Right-handed alpha
Helix 33
AD6
B
134 151Right-handed alpha
Helix 34
AD7
B
178 189Right-handed alpha
Helix 35
AD8
B
190 192Right-handed 310
Helix 36
AD9
B
193 200Right-handed alpha
Helix 37
AE1
B
202 213Right-handed alpha
Helix 38
AE2
B
229 247Right-handed alpha
Helix 39
AE3
B
249 261Right-handed alpha
Helix 40
AE4
B
271 285Right-handed alpha
Helix 41
AE5
B
286 298Right-handed alpha
Helix 42
AE6
B
300 310Right-handed alpha
Helix 43
AE7
B
316 329Right-handed alpha
Helix 44
AE8
B
332 347Right-handed alpha
Helix 45
AE9
B
351 367Right-handed alpha
Helix 46
AF1
B
368 375Right-handed alpha
Helix 47
AF2
B
376 389Right-handed alpha
Helix 48
AF3
B
392 402Right-handed alpha
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There are 2 sheets in PDB entry 5WY3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 266first strand
Strand 2
A
269 270anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 266first strand
Strand 2
B
269 270anti-parallel
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