Analysis of interatomic Contacts of Structural Units in PDB entry:
5WZE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WZE entry

There are 4 chains in PDB entry 5WZE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLU 442
B	MET 1	HIS 449
C	MET 1	GLU 442
D	MET 1	ALA 444

There are 68 helices in PDB entry 5WZE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	18	Right-handed alpha
Helix 2	AA2	A	47	55	Right-handed alpha
Helix 3	AA3	A	82	90	Right-handed alpha
Helix 4	AA4	A	93	100	Right-handed alpha
Helix 5	AA5	A	111	115	Right-handed 310
Helix 6	AA6	A	116	122	Right-handed alpha
Helix 7	AA7	A	134	151	Right-handed alpha
Helix 8	AA8	A	165	175	Right-handed alpha
Helix 9	AA9	A	177	202	Right-handed alpha
Helix 10	AB1	A	207	222	Right-handed alpha
Helix 11	AB2	A	237	241	Right-handed 310
Helix 12	AB3	A	283	302	Right-handed alpha
Helix 13	AB4	A	311	328	Right-handed alpha
Helix 14	AB5	A	334	341	Right-handed alpha
Helix 15	AB6	A	342	347	Right-handed 310
Helix 16	AB7	A	397	401	Right-handed 310
Helix 17	AB8	A	428	442	Right-handed alpha
Helix 18	AB9	B	5	20	Right-handed alpha
Helix 19	AC1	B	47	55	Right-handed alpha
Helix 20	AC2	B	82	90	Right-handed alpha
Helix 21	AC3	B	93	101	Right-handed alpha
Helix 22	AC4	B	112	122	Right-handed alpha
Helix 23	AC5	B	134	150	Right-handed alpha
Helix 24	AC6	B	151	155	Right-handed 310
Helix 25	AC7	B	165	175	Right-handed alpha
Helix 26	AC8	B	177	202	Right-handed alpha
Helix 27	AC9	B	207	222	Right-handed alpha
Helix 28	AD1	B	237	241	Right-handed 310
Helix 29	AD2	B	283	302	Right-handed alpha
Helix 30	AD3	B	311	328	Right-handed alpha
Helix 31	AD4	B	334	341	Right-handed alpha
Helix 32	AD5	B	342	347	Right-handed 310
Helix 33	AD6	B	397	401	Right-handed 310
Helix 34	AD7	B	428	445	Right-handed alpha
Helix 35	AD8	C	5	18	Right-handed alpha
Helix 36	AD9	C	47	55	Right-handed alpha
Helix 37	AE1	C	82	90	Right-handed alpha
Helix 38	AE2	C	93	101	Right-handed alpha
Helix 39	AE3	C	112	122	Right-handed alpha
Helix 40	AE4	C	134	151	Right-handed alpha
Helix 41	AE5	C	152	155	Right-handed 310
Helix 42	AE6	C	165	174	Right-handed alpha
Helix 43	AE7	C	177	202	Right-handed alpha
Helix 44	AE8	C	207	222	Right-handed alpha
Helix 45	AE9	C	237	241	Right-handed 310
Helix 46	AF1	C	283	302	Right-handed alpha
Helix 47	AF2	C	311	328	Right-handed alpha
Helix 48	AF3	C	334	341	Right-handed alpha
Helix 49	AF4	C	342	347	Right-handed 310
Helix 50	AF5	C	397	401	Right-handed 310
Helix 51	AF6	C	428	440	Right-handed alpha
Helix 52	AF7	D	5	18	Right-handed alpha
Helix 53	AF8	D	47	55	Right-handed alpha
Helix 54	AF9	D	82	90	Right-handed alpha
Helix 55	AG1	D	93	101	Right-handed alpha
Helix 56	AG2	D	112	122	Right-handed alpha
Helix 57	AG3	D	134	151	Right-handed alpha
Helix 58	AG4	D	152	155	Right-handed 310
Helix 59	AG5	D	165	174	Right-handed alpha
Helix 60	AG6	D	177	202	Right-handed alpha
Helix 61	AG7	D	207	222	Right-handed alpha
Helix 62	AG8	D	237	241	Right-handed 310
Helix 63	AG9	D	283	302	Right-handed alpha
Helix 64	AH1	D	311	328	Right-handed alpha
Helix 65	AH2	D	334	341	Right-handed alpha
Helix 66	AH3	D	342	347	Right-handed 310
Helix 67	AH4	D	397	401	Right-handed 310
Helix 68	AH5	D	428	444	Right-handed alpha

There are 27 sheets in PDB entry 5WZE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	109	first strand
Strand 2	A	74	78	parallel
Strand 3	A	62	65	anti-parallel
Strand 4	A	24	29	anti-parallel
Strand 5	A	126	129	parallel
Strand 6	A	161	164	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	40	41	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	235	first strand
Strand 2	A	256	261	anti-parallel
Strand 3	A	272	277	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	265	first strand
Strand 2	A	268	269	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	368	first strand
Strand 2	A	371	372	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	383	first strand
Strand 2	A	409	413	anti-parallel
Strand 3	A	418	420	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	386	388	first strand
Strand 2	A	404	406	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	106	109	first strand
Strand 2	B	74	78	parallel
Strand 3	B	62	65	anti-parallel
Strand 4	B	24	29	anti-parallel
Strand 5	B	126	129	parallel
Strand 6	B	161	164	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	40	41	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	235	first strand
Strand 2	B	256	261	anti-parallel
Strand 3	B	272	277	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	265	first strand
Strand 2	B	268	269	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	368	first strand
Strand 2	B	371	372	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	383	first strand
Strand 2	B	409	414	anti-parallel
Strand 3	B	417	420	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	386	388	first strand
Strand 2	B	404	406	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	106	109	first strand
Strand 2	C	74	78	parallel
Strand 3	C	62	65	anti-parallel
Strand 4	C	24	29	anti-parallel
Strand 5	C	126	129	parallel
Strand 6	C	161	164	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	40	41	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	235	first strand
Strand 2	C	256	261	anti-parallel
Strand 3	C	272	277	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	265	first strand
Strand 2	C	268	269	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	368	first strand
Strand 2	C	371	372	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	383	first strand
Strand 2	C	409	413	anti-parallel
Strand 3	C	418	420	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	386	388	first strand
Strand 2	C	404	406	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	106	109	first strand
Strand 2	D	74	78	parallel
Strand 3	D	62	65	anti-parallel
Strand 4	D	24	29	anti-parallel
Strand 5	D	126	129	parallel
Strand 6	D	161	164	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	40	41	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	235	first strand
Strand 2	D	256	261	anti-parallel
Strand 3	D	272	277	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	264	265	first strand
Strand 2	D	268	269	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	380	383	first strand
Strand 2	D	409	413	anti-parallel
Strand 3	D	418	420	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	386	389	first strand
Strand 2	D	403	406	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WZE

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WZE