Analysis of interatomic Contacts of Structural Units in PDB entry:
5WZZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5WZZ entry

There are 8 chains in PDB entry 5WZZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 93	CYS 282
B	SER 93	CYS 282
C	SER 93	CYS 282
D	SER 93	CYS 282
E	VAL 377	LYS 387
F	LYS 379	LYS 387
G	PRO 378	LYS 387
H	VAL 377	LYS 387

There are 28 helices in PDB entry 5WZZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	100	104	Right-handed 310
Helix 2	AA2	A	110	121	Right-handed alpha
Helix 3	AA3	A	140	142	Right-handed 310
Helix 4	AA4	A	143	152	Right-handed alpha
Helix 5	AA5	A	214	219	Right-handed alpha
Helix 6	AA6	A	247	253	Right-handed alpha
Helix 7	AA7	A	261	267	Right-handed alpha
Helix 8	AA8	B	99	104	Right-handed 310
Helix 9	AA9	B	113	121	Right-handed alpha
Helix 10	AB1	B	140	142	Right-handed 310
Helix 11	AB2	B	143	152	Right-handed alpha
Helix 12	AB3	B	214	219	Right-handed alpha
Helix 13	AB4	B	247	253	Right-handed alpha
Helix 14	AB5	B	261	268	Right-handed alpha
Helix 15	AB6	C	99	104	Right-handed 310
Helix 16	AB7	C	110	121	Right-handed alpha
Helix 17	AB8	C	140	142	Right-handed 310
Helix 18	AB9	C	143	152	Right-handed alpha
Helix 19	AC1	C	214	219	Right-handed alpha
Helix 20	AC2	C	247	253	Right-handed alpha
Helix 21	AC3	C	261	268	Right-handed alpha
Helix 22	AC4	D	99	104	Right-handed 310
Helix 23	AC5	D	111	121	Right-handed alpha
Helix 24	AC6	D	140	142	Right-handed 310
Helix 25	AC7	D	143	152	Right-handed alpha
Helix 26	AC8	D	214	219	Right-handed alpha
Helix 27	AC9	D	247	253	Right-handed alpha
Helix 28	AD1	D	261	268	Right-handed alpha

There are 20 sheets in PDB entry 5WZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	97	first strand
Strand 2	A	108	109	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	138	139	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	176	184	parallel
Strand 3	A	187	197	anti-parallel
Strand 4	A	203	211	anti-parallel
Strand 5	A	241	242	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	176	184	parallel
Strand 3	A	187	197	anti-parallel
Strand 4	A	203	211	anti-parallel
Strand 5	A	257	260	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	238	first strand
Strand 2	A	221	229	anti-parallel
Strand 3	A	272	281	anti-parallel
Strand 4	A	268	269	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	238	first strand
Strand 2	A	221	229	anti-parallel
Strand 3	A	272	281	anti-parallel
Strand 4	A	162	167	anti-parallel
Strand 5	G	380	383	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	95	97	first strand
Strand 2	B	108	110	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	138	139	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	177	184	parallel
Strand 3	B	187	197	anti-parallel
Strand 4	B	203	211	anti-parallel
Strand 5	B	241	242	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	177	184	parallel
Strand 3	B	187	197	anti-parallel
Strand 4	B	203	211	anti-parallel
Strand 5	B	257	260	anti-parallel

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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	380	383	first strand
Strand 2	B	162	167	parallel
Strand 3	B	273	281	anti-parallel
Strand 4	B	221	229	anti-parallel
Strand 5	B	232	238	anti-parallel
Strand 6	D	233	238	anti-parallel
Strand 7	D	221	228	anti-parallel
Strand 8	D	273	281	anti-parallel
Strand 9	D	162	167	anti-parallel
Strand 10	H	379	383	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	97	first strand
Strand 2	C	108	109	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	127	first strand
Strand 2	C	138	139	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	176	184	parallel
Strand 3	C	187	198	anti-parallel
Strand 4	C	202	211	anti-parallel
Strand 5	C	241	242	parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	159	first strand
Strand 2	C	176	184	parallel
Strand 3	C	187	198	anti-parallel
Strand 4	C	202	211	anti-parallel
Strand 5	C	257	260	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	238	first strand
Strand 2	C	221	229	anti-parallel
Strand 3	C	273	281	anti-parallel
Strand 4	C	162	167	anti-parallel
Strand 5	E	379	383	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	97	first strand
Strand 2	D	108	110	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	138	139	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	159	first strand
Strand 2	D	176	184	parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	202	211	anti-parallel
Strand 5	D	241	242	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	159	first strand
Strand 2	D	176	184	parallel
Strand 3	D	187	199	anti-parallel
Strand 4	D	202	211	anti-parallel
Strand 5	D	257	260	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5WZZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
5WZZ