Analysis of interatomic Contacts of Structural Units in PDB entry:
5X0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X0M entry

There is 1 chain in PDB entry 5X0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 47ALA 1521
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 5X0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 59Right-handed alpha
Helix 2
AA2
A
94 110Right-handed alpha
Helix 3
AA3
A
128 139Right-handed alpha
Helix 4
AA4
A
139 159Right-handed alpha
Helix 5
AA5
A
165 187Right-handed alpha
Helix 6
AA6
A
192 197Right-handed alpha
Helix 7
AA7
A
202 215Right-handed alpha
Helix 8
AA8
A
227 241Right-handed 310
Helix 9
AA9
A
247 256Right-handed alpha
Helix 10
AB1
A
257 281Right-handed alpha
Helix 11
AB2
A
305 310Right-handed alpha
Helix 12
AB3
A
360 374Right-handed alpha
Helix 13
AB4
A
376 388Right-handed alpha
Helix 14
AB5
A
393 403Right-handed alpha
Helix 15
AB6
A
408 435Right-handed alpha
Helix 16
AB7
A
503 518Right-handed alpha
Helix 17
AB8
A
520 537Right-handed alpha
Helix 18
AB9
A
544 573Right-handed alpha
Helix 19
AC1
A
574 579Right-handed alpha
Helix 20
AC2
A
581 604Right-handed alpha
Helix 21
AC3
A
606 618Right-handed 310
Helix 22
AC4
A
619 624Right-handed alpha
Helix 23
AC5
A
625 635Right-handed alpha
Helix 24
AC6
A
639 663Right-handed alpha
Helix 25
AC7
A
666 671Right-handed alpha
Helix 26
AC8
A
686 700Right-handed alpha
Helix 27
AC9
A
702 714Right-handed alpha
Helix 28
AD1
A
717 724Right-handed alpha
Helix 29
AD2
A
728 733Right-handed alpha
Helix 30
AD3
A
734 744Right-handed alpha
Helix 31
AD4
A
834 855Right-handed alpha
Helix 32
AD5
A
855 875Right-handed alpha
Helix 33
AD6
A
884 912Right-handed alpha
Helix 34
AD7
A
913 918Right-handed alpha
Helix 35
AD8
A
920 938Right-handed alpha
Helix 36
AD9
A
949 953Right-handed 310
Helix 37
AE1
A
954 957Right-handed 310
Helix 38
AE2
A
958 963Right-handed alpha
Helix 39
AE3
A
968 1002Right-handed alpha
Helix 40
AE4
A
1026 1032Right-handed alpha
Helix 41
AE5
A
1047 1059Right-handed alpha
Helix 42
AE6
A
1062 1073Right-handed alpha
Helix 43
AE7
A
1086 1089Right-handed 310
Helix 44
AE8
A
1090 1101Right-handed alpha
Helix 45
AE9
A
1107 1124Right-handed alpha
Helix 46
AF1
A
1132 1146Right-handed alpha
Helix 47
AF2
A
1159 1168Right-handed alpha
Helix 48
AF3
A
1171 1188Right-handed alpha
Helix 49
AF4
A
1194 1225Right-handed alpha
Helix 50
AF5
A
1231 1249Right-handed alpha
Helix 51
AF6
A
1260 1271Right-handed alpha
Helix 52
AF7
A
1272 1278Right-handed 310
Helix 53
AF8
A
1288 1319Right-handed alpha
Helix 54
AF9
A
1340 1351Right-handed alpha
Helix 55
AG1
A
1354 1363Right-handed alpha
Helix 56
AG2
A
1384 1396Right-handed alpha
Helix 57
AG3
A
1401 1424Right-handed alpha
Helix 58
AG4
A
1426 1441Right-handed alpha
Helix 59
AG5
A
1452 1459Right-handed alpha
Helix 60
AG6
A
1470 1475Right-handed alpha
Helix 61
AG7
A
1489 1505Right-handed alpha
Helix 62
AG8
A
1508 1521Right-handed alpha
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There are 4 sheets in PDB entry 5X0M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 67first strand
Strand 2
A
116 119anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 290first strand
Strand 2
A
341 344anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1012 1013first strand
Strand 2
A
1017 1018anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1447 1449first strand
Strand 2
A
1486 1488anti-parallel
Strand 3
A
1481 1482anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il