Analysis of interatomic Contacts of Structural Units in PDB entry:
5X0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X0W entry

There are 8 chains in PDB entry 5X0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 480GLN 615
C
 ARG 480GLN 613
E
 PHE 479ASP 626
G
 GLN 481GLN 622
B
 GLY 217ALA 302
D
 PRO 216PRO 303
F
 PRO 216ALA 302
H
 PRO 218ALA 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5X0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
483 501Right-handed alpha
Helix 2
AA2
A
504 514Right-handed alpha
Helix 3
AA3
A
519 527Right-handed alpha
Helix 4
AA4
A
527 543Right-handed alpha
Helix 5
AA5
A
550 561Right-handed alpha
Helix 6
AA6
A
564 583Right-handed alpha
Helix 7
AA7
A
595 601Right-handed alpha
Helix 8
AA8
A
604 612Right-handed alpha
Helix 9
AA9
C
484 501Right-handed alpha
Helix 10
AB1
C
504 514Right-handed alpha
Helix 11
AB2
C
519 543Right-handed alpha
Helix 12
AB3
C
550 561Right-handed alpha
Helix 13
AB4
C
564 584Right-handed alpha
Helix 14
AB5
C
596 601Right-handed alpha
Helix 15
AB6
C
606 612Right-handed alpha
Helix 16
AB7
E
480 499Right-handed alpha
Helix 17
AB8
E
504 515Right-handed alpha
Helix 18
AB9
E
519 543Right-handed alpha
Helix 19
AC1
E
544 547Right-handed 310
Helix 20
AC2
E
550 561Right-handed alpha
Helix 21
AC3
E
564 583Right-handed alpha
Helix 22
AC4
E
595 601Right-handed alpha
Helix 23
AC5
E
604 615Right-handed alpha
Helix 24
AC6
E
617 624Right-handed 310
Helix 25
AC7
G
484 501Right-handed alpha
Helix 26
AC8
G
504 515Right-handed alpha
Helix 27
AC9
G
520 543Right-handed alpha
Helix 28
AD1
G
544 547Right-handed 310
Helix 29
AD2
G
550 561Right-handed alpha
Helix 30
AD3
G
564 585Right-handed alpha
Helix 31
AD4
G
589 601Right-handed alpha
Helix 32
AD5
G
606 614Right-handed alpha
Helix 33
AD6
B
249 262Right-handed alpha
Helix 34
AD7
B
264 266Right-handed 310
Helix 35
AD8
B
282 286Right-handed 310
Helix 36
AD9
D
249 260Right-handed alpha
Helix 37
AE1
D
282 287Right-handed alpha
Helix 38
AE2
F
249 262Right-handed alpha
Helix 39
AE3
F
264 266Right-handed 310
Helix 40
AE4
F
282 286Right-handed 310
Helix 41
AE5
H
254 260Right-handed 310
Helix 42
AE6
H
264 266Right-handed 310
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There are 4 sheets in PDB entry 5X0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 244first strand
Strand 2
B
219 226anti-parallel
Strand 3
B
293 299parallel
Strand 4
B
268 271anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
239 244first strand
Strand 2
D
219 226anti-parallel
Strand 3
D
294 299parallel
Strand 4
D
268 271anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
239 244first strand
Strand 2
F
219 226anti-parallel
Strand 3
F
293 299parallel
Strand 4
F
268 271anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
239 242first strand
Strand 2
H
221 226anti-parallel
Strand 3
H
296 299parallel
Strand 4
H
268 271anti-parallel
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