Analysis of interatomic Contacts of Structural Units in PDB entry:
5X1U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5X1U entry

There are 2 chains in PDB entry 5X1U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 162GLU 367
B
 ALA 162ARG 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 5X1U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
164 172Right-handed alpha
Helix 2
AA2
A
196 209Right-handed alpha
Helix 3
AA3
A
214 218Right-handed 310
Helix 4
AA4
A
219 234Right-handed alpha
Helix 5
AA5
A
236 251Right-handed alpha
Helix 6
AA6
A
257 260Right-handed 310
Helix 7
AA7
A
261 269Right-handed alpha
Helix 8
AA8
A
271 279Right-handed alpha
Helix 9
AA9
A
283 296Right-handed alpha
Helix 10
AB1
A
302 307Right-handed 310
Helix 11
AB2
A
308 313Right-handed alpha
Helix 12
AB3
A
313 323Right-handed alpha
Helix 13
AB4
A
329 331Right-handed 310
Helix 14
AB5
A
332 346Right-handed alpha
Helix 15
AB6
A
354 366Right-handed alpha
Helix 16
AB7
B
164 172Right-handed alpha
Helix 17
AB8
B
196 209Right-handed alpha
Helix 18
AB9
B
214 218Right-handed 310
Helix 19
AC1
B
219 234Right-handed alpha
Helix 20
AC2
B
236 251Right-handed alpha
Helix 21
AC3
B
257 260Right-handed 310
Helix 22
AC4
B
261 269Right-handed alpha
Helix 23
AC5
B
271 280Right-handed alpha
Helix 24
AC6
B
283 296Right-handed alpha
Helix 25
AC7
B
302 307Right-handed 310
Helix 26
AC8
B
308 313Right-handed alpha
Helix 27
AC9
B
313 323Right-handed alpha
Helix 28
AD1
B
329 331Right-handed 310
Helix 29
AD2
B
332 346Right-handed alpha
Helix 30
AD3
B
354 368Right-handed alpha
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There are no sheets in PDB entry 5X1U
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il